SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 5616 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT3023558 Populus trichocarpa 5:926385-927296 (+) noncoding (-0.032768)- 85 29.01 2
CNT3023557 Populus trichocarpa 5:21406130-21406513 (+) noncoding (-0.0004096)- 56 19.26 1
CNT3023556 Populus trichocarpa 5:10177772-10191965 (+) noncoding (-0.0004096)- 36 35.58 2
CNT3023554 Populus trichocarpa 5:24969638-24970186 (+) noncoding (-0.0004096)- 45 7.37 2
CNT3023553 Populus trichocarpa 5:11457922-11458329 (-) noncoding (-0.0004096)- 70 10.09 2
CNT3023552 Populus trichocarpa 5:5788717-5789255 (+) noncoding (-0.0004096)- 47 5.22 1
CNT3023551 Populus trichocarpa 5:1580926-1581221 (-) noncoding (-0.200704)- 35 57.68 1
CNT3023550 Populus trichocarpa 5:23199650-23200420 (+) noncoding (-0.086016)- 50 9.21 2
CNT3023549 Populus trichocarpa 5:14544864-14545485 (+) noncoding (-0.02048)- 36 3.81 1
CNT3023546 Populus trichocarpa 5:24000203-24000567 (-) noncoding (-0.0004096)- - 0 2
CNT3023545 Populus trichocarpa 5:1499601-1502852 (+) coding (0.023)0.0000005 (sp|O64477|Y2913_ARATH) 40 5.45 4
CNT3023544 Populus trichocarpa 5:2250059-2273349 (+) noncoding (-0.053248)1e-40 (sp|F4K4C5|KN14S_ARATH) 53 0.9 2
CNT3023543 Populus trichocarpa 5:15506729-15509074 (-) noncoding (-0.028672)- 83 6.13 2
CNT3023542 Populus trichocarpa 5:247648-259708 (-) noncoding (-0.131072)- 62 13.89 2
CNT3023541 Populus trichocarpa 5:10709175-10709944 (-) noncoding (-0.049152)- 61 6.71 2
CNT3023540 Populus trichocarpa 5:21277509-21325512 (+) noncoding (-0.0004096)- 50 38.97 2
CNT3023539 Populus trichocarpa 5:10025965-10034432 (-) noncoding (-0.0004096)- - 1.28 2
CNT3023538 Populus trichocarpa 5:2818021-2818396 (+) noncoding (-0.0385024)- 52 1.51 2
CNT3023537 Populus trichocarpa 5:1768156-1769499 (-) noncoding (-0.0024576)- 47 12.71 2
CNT3023536 Populus trichocarpa 5:1008744-1044818 (-) noncoding (-0.0004096)2e-19 (sp|A0A3Q7HJG4|CURE1_SOLLC) 49 40.11 2
CNT3023535 Populus trichocarpa 5:21608312-21616114 (+) noncoding (-0.0004096)3e-68 (sp|Q84J37|LAC15_ARATH) 32 1.39 2
CNT3023534 Populus trichocarpa 5:22498870-22499707 (-) noncoding (-0.036864)- 32 15.34 2
CNT3023532 Populus trichocarpa 5:3070686-3071987 (-) noncoding (-0.004096)- 74 45.17 2
CNT3023531 Populus trichocarpa 5:3226564-3250042 (+) noncoding (-0.0610304)- 52 0.18 3
CNT3023530 Populus trichocarpa 5:20947892-20949486 (+) noncoding (-0.0004096)- 52 19.19 3
CNT3023528 Populus trichocarpa 5:119441-121347 (+) noncoding (-0.0069632)- 49 8.19 5
CNT3023527 Populus trichocarpa 5:5398543-5401354 (+) noncoding (-0.0684032)- 52 1.51 2
CNT3023526 Populus trichocarpa 5:1161002-1178621 (-) coding (0.02)- 42 3.99 2
CNT3023525 Populus trichocarpa 5:23311659-23312282 (-) noncoding (-0.0004096)- 38 11.24 2
CNT3023524 Populus trichocarpa 5:24869960-24870452 (+) noncoding (-0.0114688)1e-23 (sp|Q7PCC6|FDP_ARATH) 54 1.7 2
CNT3023523 Populus trichocarpa 5:17919679-17921468 (-) noncoding (-0.0004096)- 48 40.99 2
CNT3023522 Populus trichocarpa 5:23441649-23450298 (-) coding (0.055)9e-155 (sp|Q494P0|PHT17_ARATH) 74 7.64 2
CNT3023521 Populus trichocarpa 5:10481315-10482174 (+) noncoding (-0.0131072)- 92 15.25 2
CNT3023520 Populus trichocarpa 5:22454388-22454783 (-) noncoding (-0.0004096)- 54 38.76 1
CNT3023519 Populus trichocarpa 5:4256832-4257384 (+) noncoding (-0.086016)- 73 6.21 2
CNT3023518 Populus trichocarpa 5:3226564-3239077 (+) noncoding (-0.0315392)- 48 7.69 2
CNT3023517 Populus trichocarpa 5:1499477-1502882 (+) coding (0.023)2e-18 (sp|Q7XA65|PUS1_ARATH) 66 5.61 2
CNT3023516 Populus trichocarpa 5:19712820-19736635 (+) noncoding (-0.0004096)1e-57 (sp|B9H7I1|NRP72_POPTR) 67 46.39 3
CNT3023513 Populus trichocarpa 5:22177726-22186336 (+) noncoding (-0.0331776)- 72 58.45 2
CNT3023512 Populus trichocarpa 5:6688953-6689253 (-) noncoding (-0.0004096)- 37 19.12 2
CNT3023511 Populus trichocarpa 5:14878253-14916774 (+) noncoding (-0.0704512)- 41 37.01 2
CNT3023510 Populus trichocarpa 5:4924297-4924609 (+) noncoding (-0.0004096)- - 55.72 2
CNT3023509 Populus trichocarpa 5:2250223-2273349 (+) noncoding (-0.069632)2e-25 (sp|F4K4C5|KN14S_ARATH) 66 0.54 2
CNT3023508 Populus trichocarpa 5:23956822-23957025 (-) noncoding (-0.0004096)- 34 38.93 1
CNT3023507 Populus trichocarpa 5:21098907-21105883 (-) noncoding (-0.053248)- 57 16.49 2
CNT3023506 Populus trichocarpa 5:440709-512990 (+) noncoding (-0.012288)- 51 3.77 2
CNT3023505 Populus trichocarpa 5:970516-977061 (+) noncoding (-0.0090112)- 56 3.79 2
CNT3023504 Populus trichocarpa 5:3897851-3898284 (-) noncoding (-0.0004096)- - 1.35 2
CNT3023503 Populus trichocarpa 5:4866537-4866986 (-) noncoding (-0.0004096)- 32 37.3 1
CNT3023501 Populus trichocarpa 5:19563905-19565000 (+) noncoding (-0.0004096)- 43 9.34 1