SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 6661 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID

Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30261928 Brassica rapa A05:19594280-19598016 (-) noncoding (-0.0004096)- 69 22.18 2
CNT30261927 Brassica rapa A05:15816748-15817998 (-) noncoding (-0.0446464)- 86 12.45 2
CNT30261926 Brassica rapa A05:9688188-9688680 (-) noncoding (-0.0004096)0.00000001 (sp|Q2V3D7|DEF31_ARATH) 76 39.71 2Conserved counterparts:
CNT30261925 Brassica rapa A05:10392750-10393267 (+) noncoding (-0.115507)- 56 16.05 2
CNT30261923 Brassica rapa A05:237866-239838 (-) noncoding (-0.0135168)- 90 8.31 2
CNT30261922 Brassica rapa A05:21848292-21848784 (-) noncoding (-0.008192)1e-50 (sp|Q9SRL3|TBL32_ARATH) 88 5.42 2
CNT30261921 Brassica rapa A05:1652372-1654749 (-) noncoding (-0.13312)- 99 10.76 4Conserved counterparts:
CNT30261920 Brassica rapa A05:7673535-7675242 (-) noncoding (-0.0004096)- 32 5.8 2
CNT30261919 Brassica rapa A05:21586728-21587314 (-) noncoding (-0.0602112)- 51 16.51 2Conserved counterparts:
CNT30261918 Brassica rapa A05:22523359-22524127 (-) noncoding (-0.04096)3e-37 (sp|Q9LDB4|NLTP6_ARATH) 99 8.44 2Conserved counterparts:
CNT30261917 Brassica rapa A05:15970284-15971562 (-) noncoding (-0.161792)4e-17 (sp|Q9SU35|ERLL1_ARATH) 58 1.11 4Conserved counterparts:
CNT30261916 Brassica rapa A05:15970286-15971575 (-) noncoding (-0.109363)4e-17 (sp|Q9SU35|ERLL1_ARATH) 46 52.87 4Conserved counterparts:
CNT30261915 Brassica rapa A05:13398439-13399643 (-) noncoding (-0.0004096)- - 18.48 2
CNT30261914 Brassica rapa A05:19182903-19184685 (-) noncoding (-0.008192)- 87 7.12 2
CNT30261913 Brassica rapa A05:11879883-11880521 (+) noncoding (-0.036864)- - 2.76 1Conserved counterparts:
CNT30261912 Brassica rapa A05:16640242-16642564 (-) noncoding (-0.08192)- 60 3.44 1Conserved counterparts:
CNT30261911 Brassica rapa A05:23515457-23516440 (+) noncoding (-0.0004096)- - 4.99 2
CNT30261910 Brassica rapa A05:13266165-13266943 (+) noncoding (-0.47104)- 70 5.05 2
CNT30261909 Brassica rapa A05:8354181-8354978 (+) noncoding (-0.118784)- 56 3.55 2Conserved counterparts:
CNT30261908 Brassica rapa A05:3412901-3413797 (+) noncoding (-0.0098304)4e-37 (sp|Q43304|NLTPD_BRAOT) - 490.18 2Conserved counterparts:
CNT30261905 Brassica rapa A05:16041119-16041709 (+) noncoding (-0.188416)- 34 7.85 2Conserved counterparts:
CNT30261904 Brassica rapa A05:13542440-13547947 (+) noncoding (-0.114688)- 79 2.56 2Conserved counterparts:
CNT30261903 Brassica rapa A05:2470409-2470954 (+) noncoding (-0.043008)2e-54 (sp|O22126|FLA8_ARATH) - 108.06 2Conserved counterparts:
CNT30261902 Brassica rapa A05:311684-312100 (+) noncoding (-0.131072)- 49 0 2
CNT30261901 Brassica rapa A05:21586599-21587325 (-) noncoding (-0.0626688)- 51 0.24 2Conserved counterparts:
CNT30261899 Brassica rapa A05:2813835-2814479 (-) noncoding (-0.0004096)- 32 54.81 1
CNT30261898 Brassica rapa A05:19511761-19513957 (-) coding (0.279)3e-21 (sp|P93295|M310_ARATH) 66 3.65 5
CNT30261897 Brassica rapa A05:1822087-1822793 (-) noncoding (-0.269107)- 94 1.13 3
CNT30261896 Brassica rapa A05:9334010-9335055 (+) noncoding (-0.004096)- 47 25.89 2
CNT30261895 Brassica rapa A05:15970286-15971614 (-) noncoding (-0.124518)6e-17 (sp|Q9SU35|ERLL1_ARATH) 46 12.87 3Conserved counterparts:
CNT30261893 Brassica rapa A05:23938247-23938643 (-) noncoding (-0.0004096)- - 131.19 1
CNT30261892 Brassica rapa A05:10089684-10090844 (-) coding (0.171)2e-68 (sp|Q9S7N7|PSAG_ARATH) 84 24.22 2Conserved counterparts:
CNT30261891 Brassica rapa A05:20300708-20307373 (+) noncoding (-0.0004096)- - 1.28 2Conserved counterparts:
CNT30261890 Brassica rapa A05:19057433-19059349 (-) noncoding (-0.0950272)- 60 12.13 3Conserved counterparts:
CNT30261889 Brassica rapa A05:5930772-5931690 (-) noncoding (-0.18473)- 66 1.13 1Conserved counterparts:
CNT30261888 Brassica rapa A05:18704348-18711223 (+) noncoding (-0.0004096)- 37 4.46 2
CNT30261887 Brassica rapa A05:1492183-1492903 (-) noncoding (-0.0933888)- 69 0.23 3Conserved counterparts:
CNT30261886 Brassica rapa A05:6520490-6521554 (+) noncoding (-0.0004096)- - 85.23 2
CNT30261885 Brassica rapa A05:18242016-18242527 (+) noncoding (-0.0004096)- 32 26.16 2
CNT30261884 Brassica rapa A05:135378-136967 (+) noncoding (-0.0004096)- 32 7.72 3Conserved counterparts:
CNT30261883 Brassica rapa A05:13542440-13546642 (+) noncoding (-0.114688)- 79 14.9 2Conserved counterparts:
CNT30261882 Brassica rapa A05:7941707-7942357 (-) noncoding (-0.004096)- - 11.61 2
CNT30261881 Brassica rapa A05:19320722-19321402 (-) noncoding (-0.057344)3e-75 (sp|Q940B8|KN13A_ARATH) 78 5.67 2
CNT30261880 Brassica rapa A05:23727693-23728761 (-) noncoding (-0.0004096)- 67 10.67 2Conserved counterparts:
CNT30261879 Brassica rapa A05:23404985-23407788 (-) noncoding (-0.0004096)- 30 5.05 2
CNT30261878 Brassica rapa A05:15970287-15971270 (-) noncoding (-0.130253)0.000000004 (sp|Q9S7I2|AIR1_ARATH) 57 2.58 3Conserved counterparts:
CNT30261877 Brassica rapa A05:6816071-6824908 (+) noncoding (-0.0004096)0.0000000001 (sp|F4IRQ5|THG1_ARATH) 32 2.2 2
CNT30261876 Brassica rapa A05:23404985-23409296 (+) noncoding (-0.0004096)- 42 0.77 3
CNT30261875 Brassica rapa A05:3412914-3413835 (+) noncoding (-0.131072)0.000008 (sp|B3A0N2|NLTP_LYCBA) 66 2.99 2
CNT30261874 Brassica rapa A05:16241756-16243063 (+) noncoding (-0.026624)0.00000000004 (sp|P37116|NCPR_VIGRR) 82 0.98 4