Detailed information on CNT30712433


BLAST search results

BLAST vs Swiss-Prot:
sp|O22126|FLA8_ARATH, E-value = 2e-44

BLAST vs NONCODE:
NONGMAT001076, E-value = 2e-157

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30374387Glycine maxArabidopsis thaliana22.0519.7285.09114forward
CNT30629881Glycine maxVigna unguiculata55.1332.9986.67285forward
CNT30196566Glycine maxPisum sativum44.8716.1280.17232forward
CNT30560878Glycine maxActinidia chinensis27.2721.4982.27141forward
CNT3082470Glycine maxBrassica juncea23.428.7488.43121forward
CNT30261903Glycine maxBrassica rapa20.722.8685.98107forward
CNT30647810Glycine maxRosa chinensis25.7325.3385.71133forward
CNT30725381Glycine maxLupinus angustifolius27.2710.0982.27141forward

Expression of CNT30712433

Peptides detected in this lncRNA

>peptide 1 (48 aa)
PLEEMSEANVLHPAFSMSAVMLTSAEGGGAARIPGEMIGALISMTEML*

>peptide 2 (50 aa)
MWRLRRFLTTERGCFAATAERAALLRTRTVMVWRVLISPARRVRRRKGRM*

>peptide 3 (91 aa)
MLTEPTLPLALPVLCVVEVVEEDVEAEEVFDDGEGVFCGHGGEGGVVEDEDGDGLAGVDFAGEEGEEEERENVSHDGETIRECVREWKWEWE

Sequence

>CNT30712433
TCCGTTAGAGGAGATGAGTGAGGCGAACGTTTTGCATCCGGCTTTTTCGATGAGTGCCGTTATGTTAACGTCGGCTGAGGGAGGCGGAGCCGCGAGGATC
CCCGGCGAAATGATCGGCGCGCTGATTTCCATGACGGAGATGTTGTAGGGGATTTGTTTGACGGATTTGGTGTAGGAGGAGTCGAGTTTGGAGCCGGGAG
CAGCGGAGCCGAAGCCAACCTTACCGCCTTTGAGGTCGGTGATGTTGACGGAGCCGACGTTGCCGTTGGCATTGCCGGTGCTTTGTGTTGTCGAAGTAGT
CGAGGAGGATGTGGAGGCTGAGGAGGTTTTTGACGACGGAGAGGGGGTGTTTTGCGGCCACGGCGGAGAGGGCGGCGTTGTTGAGGACGAGGACGGTGAT
GGTCTGGCGGGTGTTGATTTCGCCGGCGAGGAGGGTGAGGAGGAGGAAAGGGAGAATGTGAGCCATGATGGAGAGACAATAAGAGAGTGTGTGAGAGAGT
GGAAGTGGGAGTGGGAG