SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 8440 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT3095476 Solanum tuberosum 8:44158742-44161281 (+) coding (0.239)- 97 1.76 3
CNT3095475 Solanum tuberosum 8:56195560-56197123 (+) noncoding (-0.0004096)- - 24.35 2
CNT3095474 Solanum tuberosum 8:47555495-47557435 (+) noncoding (-0.090112)- 70 22.87 1
CNT3095473 Solanum tuberosum 8:5574011-5576368 (-) noncoding (-0.090112)- 77 6.6 2
CNT3095472 Solanum tuberosum 8:53633755-53679027 (-) noncoding (-0.02048)1e-104 (sp|A9QY40|SBT1_LOTJA) 52 0.08 4
CNT3095471 Solanum tuberosum 8:44095557-44182238 (+) noncoding (-0.04096)1e-113 (sp|Q9SMB8|THT11_TOBAC) 43 14.53 3
CNT3095470 Solanum tuberosum 8:38921690-38922612 (+) noncoding (-0.0004096)- 42 3.59 2
CNT3095469 Solanum tuberosum 8:8039736-8040003 (-) noncoding (-0.0004096)- 35 35.68 2
CNT3095468 Solanum tuberosum 8:21337539-21339024 (-) noncoding (-0.0004096)- 57 12.29 2
CNT3095467 Solanum tuberosum 8:55951748-55959480 (+) noncoding (-0.094208)- 77 6.96 6
CNT3095466 Solanum tuberosum 8:53170160-53170457 (+) noncoding (-0.016384)- - 7.68 2
CNT3095465 Solanum tuberosum 8:54475624-54476098 (+) noncoding (-0.0004096)0.000000004 (sp|Q9LUM1|LOR11_ARATH) 92 28.49 2
CNT3095464 Solanum tuberosum 8:6278756-6293307 (-) noncoding (-0.014336)- 70 5.44 4Conserved counterparts:
CNT3095463 Solanum tuberosum 8:44272467-44274489 (-) noncoding (-0.012288)- 69 9.02 1
CNT3095461 Solanum tuberosum 8:38327533-38328257 (-) noncoding (-0.113869)- 72 30.44 3
CNT3095460 Solanum tuberosum 8:12513889-12527478 (-) noncoding (-0.0131072)- 89 1.36 2
CNT3095457 Solanum tuberosum 8:55795106-55796670 (-) noncoding (-0.126976)- 57 3.68 2
CNT3095456 Solanum tuberosum 8:32237856-32239359 (+) noncoding (-0.0004096)- 42 0 2
CNT3095455 Solanum tuberosum 8:52635113-52636262 (+) noncoding (-0.0004096)- 55 61.28 2
CNT3095454 Solanum tuberosum 8:10340335-10348628 (+) noncoding (-0.028672)- 61 4.2 7
CNT3095453 Solanum tuberosum 8:45036348-45037122 (-) noncoding (-0.06144)6e-66 (sp|O48549|RS61_ARATH) 52 172.95 2
CNT3095452 Solanum tuberosum 8:48498266-48581731 (+) noncoding (-0.0004096)3e-68 (sp|Q7XA42|RGA1_SOLBU) 39 6.17 3
CNT3095451 Solanum tuberosum 8:10340337-10348666 (+) noncoding (-0.028672)- 66 2.81 7
CNT3095450 Solanum tuberosum 8:53534987-53557759 (-) noncoding (-0.0004096)6e-122 (sp|A9QY38|SBT4_LOTJA) 49 4.92 2
CNT3095449 Solanum tuberosum 8:2347203-2357374 (-) noncoding (-0.0004096)- - 2.32 2
CNT3095448 Solanum tuberosum 8:40708022-40708484 (-) noncoding (-0.0004096)0.000008 (sp|Q03378|GLOB_ANTMA) - 43.44 1
CNT3095447 Solanum tuberosum 8:4207867-4208582 (+) noncoding (-0.0004096)- 54 6.19 2
CNT3095446 Solanum tuberosum 8:53627580-53642140 (-) noncoding (-0.0004096)0.000000000001 (sp|A0A0M3R8G2|SBT_PETHY) 36 19.11 2
CNT3095445 Solanum tuberosum 8:35385954-35389754 (+) noncoding (-0.016384)0.000000003 (sp|P92512|M710_ARATH) 57 7.69 2
CNT3095444 Solanum tuberosum 8:47922411-47929212 (+) noncoding (-0.016384)2e-151 (sp|Q7XBQ9|RGA2_SOLBU) 65 2.22 2
CNT3095443 Solanum tuberosum 8:5300674-5302002 (+) noncoding (-0.004096)9e-45 (sp|Q9SQR4|ADRC3_ARATH) 34 27.06 2
CNT3095442 Solanum tuberosum 8:41805147-41809340 (-) noncoding (-0.0004096)- 61 0.84 4Conserved counterparts:
CNT3095441 Solanum tuberosum 8:53534987-53674778 (-) noncoding (-0.0004096)9e-165 (sp|A9QY38|SBT4_LOTJA) 84 0 6
CNT3095440 Solanum tuberosum 8:9945765-9952010 (-) noncoding (-0.115917)- 71 24.36 2
CNT3095439 Solanum tuberosum 8:54908738-54910168 (+) noncoding (-0.065536)- 65 8.73 1
CNT3095438 Solanum tuberosum 8:46880693-46881162 (+) noncoding (-0.0159744)9e-24 (sp|P93531|C71D7_SOLCH) 40 0.71 2
CNT3095437 Solanum tuberosum 8:13837270-13838215 (+) noncoding (-0.0004096)- - 23.93 2
CNT3095436 Solanum tuberosum 8:7709829-7710082 (+) noncoding (-0.008192)- 45 17.17 1
CNT3095435 Solanum tuberosum 8:54352436-54357839 (+) noncoding (-0.0139264)- - 1.66 2
CNT3095434 Solanum tuberosum 8:1299471-1306629 (-) coding (0.08)1e-36 (sp|Q9S9V9|FBL23_ARATH) 55 3.61 2
CNT3095433 Solanum tuberosum 8:52445946-52446729 (+) noncoding (-0.069632)- 89 9.01 1
CNT3095432 Solanum tuberosum 8:50085132-50086724 (+) noncoding (-0.008192)- 48 0 2
CNT3095431 Solanum tuberosum 8:2414085-2414639 (-) noncoding (-0.0004096)- 53 12.97 2
CNT3095430 Solanum tuberosum 8:41805147-41809453 (-) noncoding (-0.0004096)- 66 49.35 3Conserved counterparts:
CNT3095429 Solanum tuberosum 8:47029590-47035990 (-) noncoding (-0.012288)0 (sp|O65709|FAO4A_ARATH) 51 30.1 2
CNT3095428 Solanum tuberosum 8:29826406-29838818 (+) noncoding (-0.0004096)- 69 18.42 2
CNT3095427 Solanum tuberosum 8:21438892-21441800 (-) noncoding (-0.261325)- - 0 2
CNT3095426 Solanum tuberosum 8:6322280-6322874 (-) noncoding (-0.0237568)- - 16.28 2
CNT3095425 Solanum tuberosum 8:15883592-15888306 (-) noncoding (-0.0004096)- 62 28.64 3
CNT3095424 Solanum tuberosum 8:42218471-42221390 (-) noncoding (-0.0004096)- 59 3.31 3