SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 5616 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT3025480 Populus trichocarpa 13:1162534-1163237 (+) noncoding (-0.0118784)0.000000003 (sp|Q9C7J6|HIP35_ARATH) 78 19.88 2
CNT3025479 Populus trichocarpa 13:344499-345118 (+) noncoding (-0.0004096)- 68 9.77 1
CNT3025477 Populus trichocarpa 13:14466082-14472054 (-) noncoding (-0.0454656)- 46 1.13 2
CNT3025476 Populus trichocarpa 13:4076421-4089051 (+) noncoding (-0.0004096)0.00000008 (sp|Q9ZW31|HS17B_ARATH) - 4.84 2
CNT3025475 Populus trichocarpa 13:6676946-6677266 (+) noncoding (-0.0004096)- 42 11.3 1
CNT3025474 Populus trichocarpa 13:6784369-6784874 (+) noncoding (-0.155648)- - 7.38 1
CNT3025473 Populus trichocarpa 13:947523-948675 (+) noncoding (-0.02048)- 55 23.99 2
CNT3025472 Populus trichocarpa 13:3214809-3215210 (+) coding (0.044)- 80 7.41 1
CNT3025471 Populus trichocarpa 13:5123029-5128192 (+) noncoding (-0.110592)- 61 4.88 6
CNT3025470 Populus trichocarpa 13:5602368-5641951 (+) noncoding (-0.0090112)- 79 5.95 2
CNT3025468 Populus trichocarpa 13:947649-948674 (+) noncoding (-0.0065536)- 57 86.01 2
CNT3025467 Populus trichocarpa 13:11269200-11296962 (-) noncoding (-0.0004096)- 37 0 2
CNT3025465 Populus trichocarpa 13:13339796-13355761 (+) noncoding (-0.057344)2e-43 (sp|Q9ZP56|DRP4A_ARATH) 46 4.83 2
CNT3025464 Populus trichocarpa 12:3930812-3958676 (+) noncoding (-0.0004096)- - 84.12 2
CNT3025463 Populus trichocarpa 12:11533454-11534223 (-) noncoding (-0.0004096)- 87 3.67 2
CNT3025462 Populus trichocarpa 12:342428-348931 (-) noncoding (-0.0004096)- 34 4.04 3
CNT3025461 Populus trichocarpa 12:4536660-4537080 (+) noncoding (-0.0004096)- 45 7.79 2
CNT3025460 Populus trichocarpa 12:1876862-1877816 (+) noncoding (-0.0004096)3e-34 (sp|Q5MR23|9DC3_SOLPI) - 2.44 2
CNT3025459 Populus trichocarpa 12:652827-666142 (-) noncoding (-0.180224)3e-20 (sp|Q9C637|RLP6_ARATH) 50 1.03 2
CNT3025458 Populus trichocarpa 12:12952400-12959837 (+) coding (0.104)2e-68 (sp|Q5C9I9|ISPD_MENPI) 59 50.46 2
CNT3025457 Populus trichocarpa 12:11038713-11039231 (-) noncoding (-0.0053248)- 52 3.66 2
CNT3025456 Populus trichocarpa 12:11669349-11683195 (-) noncoding (-0.0487424)- 70 4.82 2
CNT3025455 Populus trichocarpa 12:14450460-14451310 (+) noncoding (-0.0196608)- - 18.63 2
CNT3025454 Populus trichocarpa 12:2975791-3003558 (-) noncoding (-0.0004096)1e-71 (sp|Q9LYS2|AB10C_ARATH) 38 0.27 2
CNT3025453 Populus trichocarpa 12:2974474-3002190 (-) noncoding (-0.0004096)2e-22 (sp|Q9LYS2|AB10C_ARATH) 30 8.1 2
CNT3025452 Populus trichocarpa 12:4735744-4736808 (-) noncoding (-0.0131072)- 41 71.82 2
CNT3025451 Populus trichocarpa 12:11974141-11974509 (-) noncoding (-0.0004096)- 47 8.38 2
CNT3025450 Populus trichocarpa 12:11590530-11590990 (+) noncoding (-0.0004096)- 51 6.76 2
CNT3025449 Populus trichocarpa 12:12562656-12565046 (+) noncoding (-0.0004096)- 47 3.79 2
CNT3025448 Populus trichocarpa 12:14187341-14194417 (-) noncoding (-0.012288)5e-32 (sp|Q7XBQ9|RGA2_SOLBU) 57 3.73 2
CNT3025447 Populus trichocarpa 12:2744551-2744994 (-) noncoding (-0.0167936)- - 0.41 1
CNT3025446 Populus trichocarpa 12:14401261-14401930 (+) noncoding (-0.0049152)- 90 56.31 2
CNT3025445 Populus trichocarpa 12:14099436-14099914 (+) noncoding (-0.049152)- 97 7.85 2
CNT3025444 Populus trichocarpa 12:703129-712024 (-) noncoding (-0.0167936)- 74 68.06 2
CNT3025443 Populus trichocarpa 12:2902924-2904500 (-) noncoding (-0.0540672)- 63 1.51 1
CNT3025442 Populus trichocarpa 12:142897-146568 (+) noncoding (-0.0004096)- 48 25.22 2
CNT3025441 Populus trichocarpa 12:9781859-9782274 (+) noncoding (-0.0004096)- 78 17.58 1
CNT3025440 Populus trichocarpa 12:1513941-1515517 (-) noncoding (-0.004096)- 63 20.35 3
CNT3025439 Populus trichocarpa 12:10352905-10353576 (-) noncoding (-0.012288)- 41 18.56 1
CNT3025438 Populus trichocarpa 12:3160617-3161508 (+) noncoding (-0.0004096)- 61 14.6 1
CNT3025436 Populus trichocarpa 12:15362647-15363355 (-) noncoding (-0.0241664)- 72 23.12 1
CNT3025435 Populus trichocarpa 12:13288322-13289907 (-) noncoding (-0.0004096)- 82 99.48 2
CNT3025434 Populus trichocarpa 12:15386696-15393556 (-) noncoding (-0.073728)- 74 117.39 2
CNT3025432 Populus trichocarpa 12:2979781-3007791 (-) noncoding (-0.0004096)- 48 4.85 3
CNT3025431 Populus trichocarpa 12:8998559-8998898 (-) noncoding (-0.260915)- 38 5.4 2
CNT3025430 Populus trichocarpa 12:3162796-3163192 (+) noncoding (-0.0004096)- 54 26.64 1
CNT3025429 Populus trichocarpa 12:15759273-15760320 (+) noncoding (-0.0004096)- - 0 2
CNT3025428 Populus trichocarpa 12:11274603-11291210 (-) noncoding (-0.002048)0.000000000000006 (sp|M1BJF6|JOKA2_SOLTU) 57 12.47 2
CNT3025427 Populus trichocarpa 12:13639149-13639635 (-) noncoding (-0.0004096)- 53 18.7 1
CNT3025426 Populus trichocarpa 12:13097166-13098374 (+) noncoding (-0.0004096)- 49 8.61 3