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Found 3407 records

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Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30511174 Solanum lycopersicum 10:20891815-20895309 (-) noncoding (-0.0036864)- 81 2.77 2
CNT30511173 Solanum lycopersicum 10:9045153-9052604 (+) noncoding (-0.0622592)- 35 3.12 2
CNT30511172 Solanum lycopersicum 10:57357012-57364327 (+) noncoding (-0.113869)4e-99 (sp|Q05538|CHIC_SOLLC) 37 817.38 2
CNT30511171 Solanum lycopersicum 10:57322833-57323141 (-) noncoding (-0.0004096)- - 3.8 1
CNT30511170 Solanum lycopersicum 10:9727630-9734081 (-) noncoding (-0.0004096)- 68 4.7 2Conserved counterparts:
CNT30511169 Solanum lycopersicum 10:47058568-47066428 (+) noncoding (-0.0069632)0.0000000002 (sp|P08770|TRA1_MAIZE) 90 9.71 2
CNT30511168 Solanum lycopersicum 10:10290895-10330069 (+) noncoding (-0.02048)- 78 15.29 2
CNT30511167 Solanum lycopersicum 10:18298092-18301102 (+) noncoding (-0.0004096)- 42 3.89 2
CNT30511166 Solanum lycopersicum 10:49140634-49144885 (-) noncoding (-0.14336)- 67 6.17 4
CNT30511165 Solanum lycopersicum 10:54636060-54638539 (-) noncoding (-0.196608)- 61 4.41 3
CNT30511164 Solanum lycopersicum 10:15106000-15156720 (+) noncoding (-0.0221184)- 67 1.42 3
CNT30511163 Solanum lycopersicum 10:58029911-58031683 (-) noncoding (-0.0004096)- 51 63.4 2
CNT30511162 Solanum lycopersicum 10:46083470-46084170 (+) noncoding (-0.192922)- 88 530.02 2
CNT30511161 Solanum lycopersicum 10:15344457-15346035 (-) noncoding (-0.0004096)- 75 5.68 2
CNT30511160 Solanum lycopersicum 10:93670-94055 (-) noncoding (-0.098304)- 36 1.74 2Conserved counterparts:
CNT30511159 Solanum lycopersicum 10:16591755-16591994 (+) noncoding (-0.110182)- 44 52.12 1
CNT30511158 Solanum lycopersicum 10:58314150-58316884 (+) noncoding (-0.053248)- 83 15.21 1Conserved counterparts:
CNT30511157 Solanum lycopersicum 10:19191573-19194409 (-) noncoding (-0.094208)- 42 25.31 1
CNT30511155 Solanum lycopersicum 10:11605791-11606437 (-) noncoding (-0.0004096)- 64 7.98 2
CNT30511154 Solanum lycopersicum 10:63995797-63996411 (+) noncoding (-0.0004096)- - 23.95 1
CNT30511153 Solanum lycopersicum 10:51119332-51121609 (-) noncoding (-0.0045056)- 74 9.13 1
CNT30511152 Solanum lycopersicum 10:46083577-46084148 (+) noncoding (-0.14295)- 52 17.79 3
CNT30511151 Solanum lycopersicum 10:42353888-42362116 (+) noncoding (-0.120013)- 71 8.14 2
CNT30511150 Solanum lycopersicum 10:24179751-24188010 (+) noncoding (-0.053248)- 52 4.39 2
CNT30511149 Solanum lycopersicum 10:61893658-61894200 (+) noncoding (-0.069632)6e-33 (sp|Q9M2V1|NCA1_ARATH) - 5.82 2
CNT30511147 Solanum lycopersicum 10:50266119-50271746 (-) noncoding (-0.0651264)- 93 18.65 2
CNT30511146 Solanum lycopersicum 10:3324569-3333634 (+) noncoding (-0.114688)- 76 11.53 2
CNT30511144 Solanum lycopersicum 10:46083604-46084151 (+) noncoding (-0.120832)- 43 14.66 3
CNT30511143 Solanum lycopersicum 10:46913955-46921347 (-) noncoding (-0.028672)- 31 10.54 3
CNT30511141 Solanum lycopersicum 10:49476499-49485093 (+) noncoding (-0.0004096)- 46 8.85 2
CNT30511140 Solanum lycopersicum 10:58486879-58491202 (-) noncoding (-0.0004096)- 78 10.69 4
CNT30511139 Solanum lycopersicum 10:10462691-10470918 (-) noncoding (-0.0094208)- 57 6.02 2
CNT30511138 Solanum lycopersicum 10:7373417-7375684 (-) noncoding (-0.0004096)- 64 5.02 2Conserved counterparts:
CNT30511137 Solanum lycopersicum 10:53013770-53021373 (-) noncoding (-0.077824)- 55 5.83 2
CNT30511136 Solanum lycopersicum 10:38035093-38035688 (+) noncoding (-0.0004096)- 45 7.6 1
CNT30511134 Solanum lycopersicum 10:50022113-50022702 (-) noncoding (-0.038912)- 43 7.61 1
CNT30511132 Solanum lycopersicum 10:25816241-25832097 (-) noncoding (-0.02048)- 53 18.79 4
CNT30511131 Solanum lycopersicum 10:46083487-46084170 (+) noncoding (-0.129024)- 69 8.23 3
CNT30511130 Solanum lycopersicum 10:62598915-62600950 (+) noncoding (-0.08192)- 77 26.67 3
CNT30511129 Solanum lycopersicum 10:54215576-54217283 (-) noncoding (-0.065536)- 51 5.31 2
CNT30511128 Solanum lycopersicum 10:21604752-21608766 (-) noncoding (-0.0004096)- 65 7.91 2
CNT30511127 Solanum lycopersicum 10:14102558-14113782 (+) noncoding (-0.0151552)- 62 0.41 4
CNT30511126 Solanum lycopersicum 10:20892047-20895314 (-) noncoding (-0.0036864)- 82 45.62 1
CNT30511125 Solanum lycopersicum 10:56611222-56614261 (-) noncoding (-0.0004096)8e-31 (sp|P10978|POLX_TOBAC) 39 13.91 2
CNT30511124 Solanum lycopersicum 10:57357012-57364327 (+) noncoding (-0.0094208)9e-72 (sp|P85084|CHIT_CARPA) 30 30.91 2
CNT30511123 Solanum lycopersicum 10:56503202-56504523 (+) noncoding (-0.0602112)- 63 3.95 2
CNT30511122 Solanum lycopersicum 10:46083577-46084143 (+) noncoding (-0.135987)- 52 2.02 3
CNT30511120 Solanum lycopersicum 10:62602390-62604404 (+) noncoding (-0.086016)- 31 9.76 2
CNT30511119 Solanum lycopersicum 10:55056702-55073156 (-) noncoding (-0.0499712)- 44 11.42 3
CNT30511117 Solanum lycopersicum 10:58486647-58491182 (-) noncoding (-0.0004096)- 72 28.5 5