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Detailed information on CNT3099607


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3066683Oryza rufipogonLeersia perrieri23.1124.0689.78186forward

Expression of CNT3099607

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MTIFFSFFFLFISWPQSKLFSVFTLKGSGLS*

>peptide 2 (56 aa)
MGVSVWWWRALLWTRTKYDPMFCVWGESHIFRFVQECNSETSFSLPVCFGTWHAYW*

>peptide 3 (32 aa)
MHTGDWTCASSCWWCSACFWSMATALIGSSFP*

Sequence

>CNT3099607
GCACTGGTGTGATTACTGTTTCTCTGTTTGTTATTAATGAAGGTTAATTAGTCGATTAATAATATGGAGGTCCAAGGTTCTTGTACTTTCCTTAGCCCGG
GGTCCTTTTGGACTACTAAAAATCCTTGATCTGCACACTGCAAACACCTCGTTCTCTTCCAAAAAGAGGACATACATACATGGTGTTCTCTCTCTCTCTC
TCTCTCTCTGAAAGCACTGCTGCTTTACTTTGTGATGTGGCTTTCAGGATAATATGAGTAGCTATAGCTCCTCTTGTTGAATTCGATCTAGCTAGATTTT
CTTTTGTACTCCCTAACTTTTATTTCTTTTTCTCTCTCTTTTCCCTGAATTTATGTGAATGATCCTGATCCATTGATGGATGGATGGGTGTGAGTGTGTG
GTGGTGGCGTGCACTGTTGTGGACTAGGACAAAATACGATCCTATGTTTTGTGTGTGGGGGGAATCTCACATCTTTCGGTTCGTGCAAGAGTGCAACAGT
GAGACGTCTTTCAGTCTCCCTGTTTGCTTTGGAACTTGGCATGCATACTGGTGATTGGACGTGTGCTAGCAGCTGCTGGTGGTGTAGTGCTTGCTTTTGG
AGCATGGCCACAGCTCTGATTGGATCAAGTTTCCCATGACAATTTTCTTTTCTTTTTTTTTCCTTTTTATCTCTTGGCCCCAAAGCAAGTTGTTTTCAGT
TTTCACCCTCAAAGGGTCAGGGTTAAGTTAAAGTTTAGATTAATTACTTTACCCTTGGTGAGATTTGTGATGTTTAGAATAGAGTAGGTGCATATATGAT
CCACT