Detailed information on CNT3086254


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596787Vigna radiataOryza meridionalis9.3129.0184.55123forward

Expression of CNT3086254

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MEFFTKFEHPVKAARAREKTYEESKEELPMEGYKS*

>peptide 2 (30 aa)
MAALRRTSNTATTLVGENDASGWVKGRRIL*

>peptide 3 (58 aa)
MPRKSKTLHSFNFHLIFNFLKHFLHGSIGERHVFGVKNLSNVSVKVSLSLLLIGNWRK*

>peptide 4 (36 aa)
MYYRKERRKASKTTSNGGFGVCWFQMAEWRRVQRCS*

>peptide 5 (50 aa)
ESTLKKNEKKNHLAKEFNRQILLNLLFQHYSKKLIHFQYMTFIHCYELLL*

>peptide 6 (50 aa)
MLKIFLKNLNPPNKNNVLPKGTQKSFKNYLQWRFWGLLVPNGGMAARTTL*

>peptide 7 (48 aa)
MESITVKPSIIQNLSQNNRTTITNSKNSNFSPKNHINEKMFNKTSNHS*

>peptide 8 (55 aa)
MCLFISLASGSFANEVQNQQGFVERKECTIGAQPHFFVRNEGEIEWSSSRSSSTL*

>peptide 9 (81 aa)
MIKIQITQQSLNAQNFFKELKPTEQKQCITERNAEKLQKLPPMAVLGFVGSKWRNGGAYNVVVNGSTPANFKHRDHACGGE*

>peptide 10 (79 aa)
MLFCKSHSLLSNLQMNASKKQNPSLFQFPPHFQFFKTFSTWINRRTTRVRCQKFVKCECQSIIILIIDWKLEKVGGVTV*

Sequence

>CNT3086254
AAGAAAGTACACTAAAGAAAAACGAAAAGAAAAATCACCTTGCTAAAGAGTTCAATAGGCAGATCTTGCTAAACCTCCTTTTCCAACATTATTCAAAGAA
ACTAATACATTTTCAATACATGACATTTATCCATTGTTATGAGCTTCTTCTTTAATGGAATCCATAACTGTTAAACCAAGCATAATACAAAACCTAAGTC
AAAATAACCGAACAACAATCACAAACTCAAAAAATTCAAACTTTTCACCCAAAAACCACATCAACGAGAAAATGTTCAACAAAACTTCAAACCATAGTTA
GCCATACCACGATAAACAACAAAATAAAACAACAACCCCAAAATGCCCAAATTTTTTTAAAGAACTAAACTCACCGAACAAAAACAACACATTACCAAAA
GCAACGCCGGAAAGCTTAAAAAATCACCTCCAATGGCGGTTCACAGTTAATTAGACCATGATAAAAATCCAAATAACACAACAATCCCTAAATGCTCAAA
ATTTTTTTAAAGAACTTAAACCCACCGAACAAAAACAATGTATTACCGAAAGGAACGCAGAAAAGCTTCAAAAACTACCTCCAATGGCGGTTTTGGGGTT
TGTTGGTTCCAAATGGCGGAATGGCGGCGCGTACAACGTTGTAGTTAATGGCAGCACTCCGGCGAACTTCAAACACCGCGACCACGCTTGTGGGGGAGAA
TGATGCGAGTGGGTGGGTGAAAGGAAGGAGGATTCTCTAGAATGCTCTTCTGCAAGTCACATTCTCTTCTTTCAAACCTTCAAATGAATGCCTCGAAAAA
GCAAAACCCTTCACTCTTTCAATTTCCACCTCATTTTCAATTTTTTAAAACATTTTCTACATGGATCAATAGGAGAACGACACGTGTTCGGTGTCAAAAA
TTTGTCAAATGTGAGTGTCAAAGTATCATTATCCTTATTATTGATTGGAAATTGGAGAAAGTAGGTGGTGTCACGGTTTAAGAGATGATACGGTGTTCCA
AGACGCAATGTGCCTTTTCATTTCTTTAGCGTCCGGTTCCTTCGCGAATGAAGTTCAGAATCAACAAGGGTTCGTAGAACGAAAGGAGTGTACAATTGGG
GCGCAACCCCACTTTTTTGTTCGTAACGAGGGAGAGATAGAATGGAGTTCTTCACGAAGTTCGAGCACCCTGTAAAGGCTGCTAGGGCTAGGGAGAAAAC
ATACGAAGAATCAAAGGAAGAACTCCCAATGGAAGGGTATAAATCTTAGCTCATCTAAGAGCAGATGCCCTCCTCCTCACCGACTCTTCCACTCTAAGCT
TATTACTAGGCAAAATTTCAT