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Detailed information on CNT3078159


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30712713Brassica junceaGlycine max6.6722.2686.6775reverse complement

Expression of CNT3078159

Peptides detected in this lncRNA

>peptide 1 (70 aa)
MVGLDSSGSIAMEVDLRFGAMDLGQVHLGMLAGECLASLPKLIWSYCSSVLQISRREFTVASPALSVVLE*

>peptide 2 (30 aa)
KIFRSRVTSHMDSSMYSSTPDPEMWSFKAY*

>peptide 3 (44 aa)
KFSDRELPATWIVQCTPQLLTLKCGHSRHISMTYSSCSNQGSQF*

Sequence

>CNT3078159
GAAAATTTTCAGATCGAGAGTTACCAGCCACATGGATAGTTCAATGTACTCCTCAACTCCTGACCCTGAAATGTGGTCATTCAAGGCATATTAGCATGAC
ATACTCCTCATGTTCAAACCAGGGTTCTCAGTTCTAGGACGACCATGACCATAATCTTTCAAATCAAGTCTAATTAATTGAAAAAAAAAAGAAAAGTTTT
AAGAGAAAGCTATTTCGACCTTTCCCTTTCCTCTTTGCTCGACGTCTCTGGTTTGCCGTGGGATTGCGGTCGGATCCGACGGCTCAAATCGGTTGCAAGG
GTGTGTGCTCGGCCTCTCTGGAGCGTTGGCGAGGTGATGGTGGGTCTCGATTCTTCAGGAAGCATCGCTATGGAGGTAGATCTGAGATTTGGTGCGATGG
ATCTGGGTCAGGTACATCTTGGAATGCTCGCCGGAGAATGCTTAGCGTCGCTGCCTAAGCTCATCTGGAGCTACTGCTCCTCCGTGCTTCAAATTTCCAG
AAGGGAGTTCACTGTCGCTAGTCCTGCCCTCTCTGTGGTTTTGGAGTGAAATCTTTTCCAGTGTCACTAGCGGGGAGGGACCGGAATCAGGAGCTTAAAC
CTCCGCTTGCTCCCGCTAGAAACACTCCGTGTCTACATTGCTCACTTATTCTCCTGGTAAGGGATTCTCAGGACGCCGTCTAGTTAGCTTCTGGAGCACA
CAGCATCTGGAGTAGACCACTCTGTGCGTGATGACCGGACCAGGACTTAGTCACCCCTGCTTTGCTTATCCGCCTTTAGGGTCGCCTTAGGGACATTCTG
CGGGTCCTCAGAGTGTTCTCCGGCTGTTCTTTTCTTCTGGTCTTCGTTCTTGTTGCAGGTTCCGGAGACAAGGTTCAACGAGGGTCTACTGGAAATTCAT
AGCGGTAAAAAGTTACTTGTTTAGCTAAGCTTTAACCTTAGTCTTAGGACTTGGTTAGACCTAATTGTCTTTCAAAGTTTTTTTTTCTTTTTTTTTTTGG
ACTCTGTTAGACCTCTGCTTTAGATAGCTATTAGCTGCCATTGATACATTAGGATTTATTCTCAAAGACTTTGTATCCCATATCTCATTATCTTGATAAC
GAAATTCACATACTTAACAAAAAA