Detailed information on CNT30712713


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONMEST001876, E-value = 3e-62

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30615873Glycine maxSesamum indicum26.7120.6493.3390forward
CNT30403753Glycine maxBeta vulgaris31.754.9989.72107reverse complement
CNT3044715Glycine maxPrunus dulcis26.1111.5393.1888forward
CNT30221081Glycine maxHordeum vulgare23.743.9586.2580reverse complement
CNT3078159Glycine maxBrassica juncea22.266.6786.6775reverse complement

Expression of CNT30712713

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MIHISGSGADEHIKLSMWLRALTVQAQRRNYQRRALPLS*

Sequence

>CNT30712713
ATAAATTGGATCTCACCTGAATCGCCCCATCTATCCTCCTGAGGATAAGTTTGGTTTCAAACCCCGGTTCAAACAGGAGAAGTACGCCATGCTAATGTGC
CTTGGATGATCCACATCTCAGGGTCAGGCGCCGATGAGCACATTAAACTATCCATGTGGCTGAGAGCCCTCACAGTCCAGGCACAACGACGCAATTATCA
GAGGCGCGCTCTACCACTGAGCTAATAGCCCGTCGTGCGGGCCTCCCGCCGGGGCCCGCTATGCCAAAAGCAAGAGAAACCCCATCCCTCTCTTTCCTTT
TTTTCACCCCATCCATGTCGCCCCCGTGTGGCGACAT