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Detailed information on CNT3076040


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FH21|DTX55_ARATH, E-value = 1e-52

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30377542Brassica junceaArabidopsis thaliana79.6812.6691.24251forward

Expression of CNT3076040

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MSSCWRRISIRGWRLMAATGKLMSQIFFISS

Sequence

>CNT3076040
GGTGAGAAAAGACGAGACCGCGACTCCAGCGACGCCGAGTGAGATGTAAAACGTGAAGAAAGCAGTAATGGGGAGATGAAGAAGGACGGAGATTAACGTG
CACCACATCAAAGGCCACGTGGTGCCTTTACAACGCAAGTAAATACGTAAAGGATGAAGGAAGCTATTAGCTAGGAGATCAGGCAGAGAGAAGGAGCAAT
AGAGAGATGCGACACGTGTGATGTCTTCTTGTTGGCGGAGGATTAGCATTAGAGGTTGGAGGCTCATGGCGGCCACCGGGAAACTTATGTCCCAAATTTT
CTTCATCTCCTCCAC