Detailed information on CNT30377542


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FH21|DTX55_ARATH, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3076040Arabidopsis thalianaBrassica juncea12.6679.6891.24251forward

Expression of CNT30377542

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MKETISEKIRQREGTIERCDTSDIMLLAEHQH*

>peptide 2 (59 aa)
HSCTQYILHVMVISHRIHISLHHPIHDSTPFNNAKSSTVLCFIKFYILSLSNEDTYINV*

>peptide 3 (30 aa)
MSCSLGSLICSWRPPENLCPKFSSAPPPPF*

>peptide 4 (77 aa)
MAAAASATFGSGRYPARTVMNSYHHHSKQTAIQLGTANLTSVDHTSFSPESLEPYSINGVSRQRDLEVVLSLLLFSK*

>peptide 5 (70 aa)
MLMAATGKLMSQILFSSSTTFLNILNKKIIIIREEIFERLYLRKKFTKNRSFRFNLVPRALSGCTCVGDL*

>peptide 6 (30 aa)
MLVKPMAKAPPASSRLPSRPIHTTDVMFFR*

Sequence

>CNT30377542
CACTCATGCACCCAATATATATTACACGTCATGGTCATTAGCCATCGCATCCATATAAGTCTTCATCATCCAATCCACGATTCCACTCCCTTCAATAATG
CAAAATCTTCAACAGTTTTGTGTTTCATAAAGTTTTACATTCTGTCCTTGTCCAATGAAGACACTTACATAAATGTATAAGTTTTAAAACAAAAGCAAAT
CATTGAGACATAAATGGAGATAGTATATATGAAGAACAAAAAGAAAAGAGAAGGAAAAACTGTTAGTGTAGGCCTTCTTCGCATTTGACAATAATTTGAT
CGACATTAGGTGAAATGACGTTCTTGCCCACCAAGTCATGAGCCTTCAAGGACTCTTTGTTCCAATCTGTGTTATAAACAACGGTCAAAATGGAGATTGC
ACAAGCTAGCTGTGCCCCAAGCAAGCCATAGCATAGGCCCATGAAGCCTAAACCCCACACAAACGCTAAAACAACCGCCACTGGTGCTCCAACTACATAG
AAGGCGTAGAAATTAATCTTGGCCCCTATACCTGGCCTCGCACTGCCACGTAAGATTCCACAGCTAATGGTCTGAGGACAGTTGGCAAGCTCACAAGCTC
CAATCACCGGAATAACCGCCGCCGTCAGCTCGAGGACAACTTTGTCGGCGGTGAAAACTTTTCCCCAAGCTTCTCTCCCCACGGTGGTCCCCACAAGTCC
AAACACTGACACTGCCACGGCGGCTCCGACAGCCACAGTCGCCGCTGTTTTTGCTTTCTCTGGCCGTCCTGCTCCTAACTCGTTGCTTACCCTCGTGGAT
ACCGCGGCCGAGAGGGCCGTTGGGATTGTATACATCAATGAGGTTGTTTGTATCACGATGGCGGCTGCTGCTAGCGCCACCTTCGGCTCGGGGAGATATC
CAGCGAGGACCGTCATGAACTCGTACCACCACCACTCCAAGCAAACCGCTATACAGCTCGGAACAGCGAATTTAACCAGCGTTGACCACACATCATTTTC
ACCGGAGTCTCTCGAACCATACAGCATCAACGGCGTATCAAGACAAAGAGACTTGGAAGTGGTTTTGTCGTTGTTGTTGTTTTCCAAGTAGATGTAGCAA
AGGAGAAGCGACAAAGAGATGAAGTTGGTAAGAAAAGAAGAGACGGCGACTCCGGGAACTCCGAGAGAGATGTAAAACGTGAAGAAAGCAGTAATGGGAA
GATGAAGAAGGACGGAGACTAACGTGCACCACATCAAAGGCCAAGTGGTGCCTTTACAACGTAAGTAAATACGTAAAGGATGAAGGAAACTATTAGCGAG
AAGATCAGGCAAAGAGAAGGAACAATAGAGAGATGCGACACGAGTGATATCATGTTGTTGGCGGAGCATCAGCATTAGAGGCGCGAGGTTTAGCCAAAGG
AGTGATATGGGAAGAGAAGCTAAGAGAAGGAGGAAGATGGTTCGCTTGAGGGTTAAGGAAGCGAGTGAAGGGTTTTTAGAACCGATGGCTTGACCACATA
ATGGTTCCATACCGGTGGCTAAACCAGAGAGGACGGAGTAACCGGTGATGTTGGTGAAACCGATGGCTAAGGCTCCTCCTGCGAGCTCAAGGCTACCGAG
TCGTCCCATACACACGACGGATGTCATGTTCTTTAGGTAGTTTAATATGCTCATGGCGGCCACCGGAAAACTTATGTCCCAAATTCTCTTCAGCTCCTCC
ACCACCTTTTTAAATATTTTAAATAAAAAAATAATAATTATAAGAGAGGAGATATTTGAAAGACTCTATCTGAGGAAGAAGTTTACTAAGAATAGAAGTT
TTAGATTTAATTTAGTACCTCGGGCATTGTCGGGTTGTACTTGTGTTGGAGATTTATGAGACGTGAATCTTCTTCGACCACCATTGTTAGTGTTTGTTTA
TTGAGATGAGAGATTTAAAAAATATGAAGAGAAGATGCCATTTTATAAAGAAATTTTATTTGTTTTGTTTTGTAACATGGAG