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Detailed information on CNT30729010


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LF98|ALFC8_ARATH, E-value = 1e-59

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30571536Corchorus capsularisVitis vinifera19.924.1591.74121forward

Expression of CNT30729010

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MEAFSGTLTKLSITLVGTKSGLRVSLECALLKGTDSVLGNNLRGNLW*

Sequence

>CNT30729010
CTCCATTATAAAAAGCAGAGAATATTGTTTTTAAACTGAAAATAAACAAAACATGTCCAAACTCAGACGAGCCACTAAGGGCTCCCCAAGCTTATTAAGT
CTGATTTTCACCCTCTAAATTCCATGAGAAACGACACAAACCCAAAAAGGAAAAAAGTTCTAAAAGCCTAAAAATATTCATACCGCAATGTACTCTGCAA
AATAGACATTAAAAAGAGACCACAAAAGCCTATCTTCTTAGTATTTGTAGTCCTTGACATGGAGGCTTTCAGCGGCACCCTCACCAAGCTTAGCATCACC
CTTGTAGGTACCAAGAGTGGCCTCAGAGTTAGCCTTGAGTGTGCTCTGTTGAAGGGCACGGACAGTGTACTCGGCAATAACCTCAGGGGCAACCTTTGGT
GAATCAGAACCAGGGGTAACCATGTTAGGCTTCAATAGGGTACCCTCAAGCATGACATGGTGGTCATTGAGAGCCTTGTAACAGGCAGCAAGGACGCGCT
CTGTAACCTCAGCACATTTCTTGATGTCATGTGATCCATCAACAAGGATTTCGGGTTCAACAATTGGGACAAGTCCACATTGTTGGCAGATAGCAGCATA
CATGGCTA