Detailed information on CNT30725254


BLAST search results

BLAST vs Swiss-Prot:
sp|P12329|CB21_MAIZE, E-value = 2e-129

BLAST vs NONCODE:
NONMTRT001605, E-value = 2e-84

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30702989Lupinus angustifoliusQuercus lobata66.1770.2680.63671forward

Expression of CNT30725254

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MANLPFFSSFTFNSAKASGSSARPNGSKLPPG*

>peptide 2 (51 aa)
MDQAWVSQVVKPALTEDLGSSLEPHSLTEFNTVTSQELWEDNSQSSKHSPP*

>peptide 3 (59 aa)
MFYFFRCSVSGDKVGGKCPSIVVDWVCNMVGKVLQWTLTSDNSLNKETEHGEHGQPSIL*

>peptide 4 (35 aa)
MGRASPPGRPRMGKKGPWLRLPFLNDGDELVFMFM*

>peptide 5 (36 aa)
MEILPTPSSGADGESFTAWPAKDGEERAMVEAAIFE*

Sequence

>CNT30725254
TTCAAATATCAAATTGAAGAGAGAACAACGGCCAACCAGATTAGAAATTAAGTTGCATTAATTTAGATCAAATAGATAAACACAATAATTCACATTAACT
GAAGAAGTACAATTTTAATGTTTTATTTTTTTCGGTGCTCAGTTTCCGGGGACAAAGTTGGTGGCAAATGCCCAAGCATTGTTGTTGACTGGGTCTGCAA
TATGGTCGGCAAGGTTCTCCAATGGACCCTTACCAGTGACAATAGCCTGAACAAAGAAACCGAACACGGAGAACATGGCCAACCTTCCATTCTTTAGCTC
CTTCACCTTCAACTCAGCAAAGGCCTCTGGGTCATCAGCAAGGCCCAATGGGTCAAAGCTGCCACCGGGGTAGAGTGGGTCAGTGACCTCTCCAAGAGGA
CCACCTGCAATTCTGTAACCCTCAACTGCACCCATCAAGATAACTTGTGTAGCCCATATGGCAAGGATACTCTGAGCATGGATCAAGCTTGGGTTTCCCA
AGTAGTCAAGCCCGCCCTCACTGAAGATCTGGGATCCAGCCTTGAACCACACAGCCTCACCGAATTTAACACCGTTACGAGCCAAGAGCTCTGGGAAGAC
AATTCCCAAAGCTCCAAGCATAGCCCACCGTGATGGATCACCTCCAACTCACGGTTCTTGGCAAAGGTCTCTGGGTCAGCTGAAAGCCCAGCAGTGTCCC
AACCATAGTCACCAGGGAACTCACCAGTCAAGTAGCTTGGGGCCTCACCAGAGAATGGGCCCAAGTACTTAACACGGTCTGGGCCGTACCATGGGCTTCC
AGAGGAAACTTTCTTGGTGACAGTTTTCCTCATGGAGATCCTTCCAACTCCGAGCTCTGGAGCTGATGGGGAGAGCTTCACCGCCTGGCCGGCCAAGGAT
GGGGAAGAAAGGGCCATGGTTGAGGCTGCCATTTTTGAATGATGGTGATGAGCTTGTGTTTATGTTTATGTAGGGAGTAGTGATTGGAAAAGATGAGAGA
TTTGAGGAAACATG