Detailed information on CNT30720167


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30555224Triticum speltaOryza glaberrima62.5620.9294.89274forward

Expression of CNT30720167

SRR9114152: 0.0 RPKM

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MLLPALSRAEPEFFIRMSAGKARRKAAIPSAFFLFDEKQIDISISESVFLTQLISPLRRAFPLVVRDMHLI*

>peptide 2 (52 aa)
CCCQRFPGPSRNSLLECRQAKPEGRLLFPRPSSFSMKNKSTSQSPKAFSLPS*

>peptide 3 (44 aa)
MRSIKKASLWEAAGITKRGCFPVLHRKKDKGEDALRLSFFLPRLP

Sequence

>CNT30720167
ATGTTGTTGCCAGCGCTTTCCCGGGCCGAGCCGGAATTCTTTATTAGAATGTCGGCAGGCAAAGCCCGAAGGAAGGCTGCTATTCCCTCGGCCTTCTTCC
TTTTCGATGAAAAACAAATCGACATCTCAATCTCCGAAAGCGTTTTCCTTACCCAGCTAATATCCCCCCTTCGTCGAGCCTTTCCTTTAGTGGTAAGGGA
TATGCACCTTATCTGAACGTCTCCAGGCATTCCGGAATTCTCCTTTTTTGGCCCCGGGTGAACATAGGCTCAAACATGATTGGAGGGGTCCTAGCTACGC
CATGCGTTCAATAAAAAAAGCAAGCCTCTGGGAAGCTGCAGGGATTACAAAAAGAGGGTGCTTTCCTGTGTTGCACCGAAAAAAGGACAAAGGAGAAGAC
GCTCTTCGACTTTCTTTCTTCCTCCCGCGCCTGCCTAA