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Detailed information on CNT30715169


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SIY8|LAC5_ARATH, E-value = 1e-58

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30646848Malus domestica goldenRosa chinensis84.1567.181.49308forward

Expression of CNT30715169

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MVGNTNDTLFMLAVKRVPFGPWHLLALKLLGQLLSPRPTVKKRFSSISVGTSTFLGLLKLLVKAEAVFVS

>peptide 2 (50 aa)
AILQLVSSSARRRLPERAAHISCVVECQRRVCWKIGSKNSGNVLLVSLKD*

Sequence

>CNT30715169
GCCATACTTCAACTTGTATCCTCTAGTGCCAGGCGTAGGCTGCCAGAGAGAGCGGCTCACATTTCCTGTGTAGTCGAATGTCAGCGGAGGGTTTGCTGGA
AAATCGGCAGTAAAAACTCCGGGAATGTTTTGTTGGTAAGCCTGAAGGATTGAGATGGTTGGAAACACGAATGACACATTGTTCATGCTGGCAGTGAAGC
GTGTCCCGTTTGGGCCTTGGCACCTTCTGGCTCTGAAATTATTAGGGCAGTTGTTAAGTCCAAGACCGACTGTGAAGAAGAGGTTTTCGTCGATTTCAGT
TGGGACTTCAACTTTTCTTGGACTTCTGAAGCTCTTGGTGAAAGCAGAAGCAGTGTTTGTGTCATT