« Back to Malus domestica golden search


Detailed information on CNT30715024


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30700605Malus domestica goldenQuercus lobata25.7413.9491.4370reverse complement

Expression of CNT30715024

Peptides detected in this lncRNA

>peptide 1 (40 aa)
AELGRASLQLKWGHQDGGTSVQLIWQGFAVAICRLARSKL*

>peptide 2 (66 aa)
MVGHRFNSFGRALLLQFAGSPVPSCELGHVVRAMREAGLTELRKPLALNNGRITGWCTASPDCLMG*

Sequence

>CNT30715024
GCCGAGTTAGGTCGCGCTAGCTTGCAACTCAAGTGGGGGCACCAAGATGGTGGGACATCGGTTCAACTCATTTGGCAGGGCTTTGCTGTTGCAATTTGCA
GGCTCGCCCGTTCCAAGTTGTGAGTTGGGTCATGTGGTTCGGGCAATGCGTGAGGCTGGTTTAACAGAGCTGCGAAAACCTCTCGCTCTCAACAACGGAA
GGATTACGGGTTGGTGCACCGCTAGCCCAGATTGTCTCATGGGTTGAGACCTTGTTGTGAACCACCACCTTT