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Detailed information on CNT30714745


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LT78|RD21C_ARATH, E-value = 3e-41

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30705576Malus domestica goldenPrunus avium42.442.4991.92198forward

Expression of CNT30714745

Peptides detected in this lncRNA

>peptide 1 (63 aa)
LETEALRDITNGVITRAAVFSSSAANRILIVAATIDEAEAIKFIKATACLIRWTVGEVPTITW*

>peptide 2 (44 aa)
MFDQMDSRRSPHNHLVTEMVVVVVVMVVEEVGVERLGKVQMTLW*

Sequence

>CNT30714745
CTTGAGACAGAGGCCCTCAGAGACATCACAAATGGGGTAATCACTCGGGCAGCAGTATTCAGTTCCAGTGCAGCAAACCGCATTCTGATAGTCGCAGCAA
CCATAGATGAGGCAGAAGCCATAAAATTCATAAAGGCAACAGCATGTTTGATCAGATGGACAGTAGGAGAAGTCCCCACAATCACTTGGTGACGGAGATG
GTGGTGGTGGTGGTGGTGATGGTGGTGGAGGAGGTGGGGGTGGAGAGGCTGGGGAAGGTGCAGATGACTCTTTGGTAGGATATGAAGCCATGGCGTTGAT
TGCACAAACCCCATATGTTAAACTAGTGTTCCTTCTAATGTAAATGTATCCATCCATCCCCCAACTAGTCCCCCATGAATTCTTTACAATCCAGTAATCT
TCATCACCTTCAGAACCATATCCCACTATAAGAACCGCATGGTCAATGTCGTCTGGATCAGAGGAGC