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Detailed information on CNT30714679


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30499788Malus domestica goldenCoffea canephora11.4822.5310073reverse complement
CNT30403020Malus domestica goldenBeta vulgaris11.4826.7410073reverse complement
CNT30611088Malus domestica goldenArabis alpina11.1620.9498.5971forward
CNT30653503Malus domestica goldenRosa chinensis12.4231.2398.7379reverse complement
CNT30214655Malus domestica goldenHelianthus annuus12.2635.9410078reverse complement
CNT30342067Malus domestica goldenEragrostis tef10.6920.1886.7668reverse complement

Expression of CNT30714679

Peptides detected in this lncRNA

>peptide 1 (29 aa)
QARSLSLSLSLSPLAGVPPRRCAFHELRR*

>peptide 2 (29 aa)
MMRENQSSENSKPVKLKLSSGVVKSKCLR*

>peptide 3 (43 aa)
MFEVGHFLKGPQVVGSKNYAVHQALSMTSKYSTLHLSQPNQEE*

>peptide 4 (39 aa)
MFHGKRIATGNTKRGIPRIELGTSRTQSENHTTRPNALY*

>peptide 5 (53 aa)
KLALSLSLSLSLLLLVFHLVAVHFMNSGDDERKSVIGKFQTGKTETFFRCGKI*

>peptide 6 (44 aa)
MPVDLGSNLQMFGLTRRCVSIRKTVMQFAVELFNISCFLFGWIC*

>peptide 7 (29 aa)
MRQYQEDGDAICSGTIQYKLFFIWLDMLS*

Sequence

>CNT30714679
CCAAGCTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTTGCTGGTGTTCCACCTCGTCGCTGTGCATTTCATGAACTCCGGAGATGATGAGAGAAA
ATCAGTCATCGGAAAATTCCAAACCGGTAAAACTGAAACTTTCTTCAGGTGTGGTAAAATCTAAATGTTTGAGGTAGGGCATTTCCTGAAAGGGCCTCAA
GTAGTCGGAAGCAAGAATTATGCGGTGCACCAAGCCTTATCAATGACGTCCAAGTACTCAACTCTTCATCTTTCGCAACCAAATCAAGAAGAGTAATGTT
CCATGGAAAAAGAATAGCCACAGGTAACACAAAAAGGGGCATTCCGAGAATCGAACTCGGGACCTCTCGCACCCAAAGCGAGAATCATACCACTAGACCA
AATGCCCTCTACTGATGATTAGAACGTGCAAATAGTTAATTAGCCTGACAAAGGATTGGTTCTGTTTTGTCTACTCTTCATGTGATATGCCCGTGGATTT
GGGATCTAACCTTCAAATGTTTGGTTTGACCCGCAGATGCGTCAGTATCAGGAAGACGGTGATGCAATTTGCAGTGGAACTATTCAATATAAGTTGTTTT
TTATTTGGTTGGATATGTTAAGTTGAGTTTTCACAT