CANTATAdb - search

Detailed information on CNT30710766

BLAST search results

BLAST vs Swiss-Prot:
sp|Q9S7M0|CB3_ARATH, E-value = 1e-75

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30574379	Glycine max	Vitis vinifera	17.52	20.7	85.92	206	forward

Expression of CNT30710766

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MDKVWVSQIVKPTFGEYLGSSFEPHWLLEVHSQPLL*

>peptide 2 (35 aa)
MTLDMYDPPLSNIWSKYSLSSYICLHNFSFYTRKL*

>peptide 3 (72 aa)
MIPPCLTYGQNIHLVPIFVFIILVSIRENCNFCSHTISFSSLSLCGFTLSKNSTIVLATRTKTLILCVRTKT*

>peptide 4 (49 aa)
MANLPFLISLTLSSAKVTGSSARPSGSKITWKPSTARMLCAWTRFGFPK*

Sequence

>CNT30710766
ATATTAACAAACAAGAGACATCCGAGGTTTAAATTGAACCTTAGTCCTTAAGAAGTACACTAATCCAACAATTATTGTGATCATATAATCTACACATAAA
TCACAAAGGTAAGCACGAGGGATGGGATCATAGGGATTAGGGAAGAAGAAGTCATATACATTTTAAGACCCTGGGGAAAACTTAGTGGCATAGACCCAAG
CATTGTTCTCCAATGGACCTTTTCCAGTGACAATAGCTTGAACAAAGAATCCAAACATAGAGAACATGGCCAACCTTCCATTCTTGATCTCCTTGACTTT
GAGCTCAGCAAAAGTGACTGGGTCATCAGCTAGGCCCAGTGGGTCAAAGATAACTTGGAAGCCCAGCACTGCCAGGATGCTTTGTGCATGGACAAGGTTT
GGGTTTCCCAAATAGTCAAGCCCACCTTCGGAGAATATTTGGGCTCCAGCTTTGAACCACACTGGCTCCTTGAAGTCCACTCTCAACCACTTCTCTAGCA
CCTCTGGGGTGATGCATCCTAGTGCTCCAAGCATGGCCCATCGCCCATGGATCACCTTGTACCACATAATAACAATTTAGTGTTATCATTAGGGAAAAAT
CACTTTCATTAAAATTATGACACTTGACATGTATGATCCCCCCTTGTCTAACATATGGTCAAAATATTCACTTAGTTCCTATATTTGTCTTCATAATTTT
AGTTTCTATACGAGAAAATTGTAACTTTTGTTCCCACACAATTTCTTTTAGCAGTTTATCACTCTGCGGTTTTACACTTTCAAAAAATTCTACTATAGTA
TTAGCCACAAGGACCAAAACATTAATTTTATGTGTGAGAACTAAAACTTAAAGTTTTATCATATAAAGACTAAAACTTAAGACAAGGACAACTATAAGAA
GCAAGTCAATAATTCATCCTTATCAAATTAAGAGTAGTAACTAGTAATAGTCAAAAGAAAATTTGCTCCATCATTAATTGGTCTCACTATAACAAATGAT
AGAAGCCCATAATCAAATAAAGAAGACTCTTGTTGTAAAAGAGTAATGGAAGTTTAGAACCTTAAAATTAAAGTAAAATCAGTTAGAACCTTCTGTACTA
TACTAAATTAGTTTGTTTGTTTTTTTAAAAATTAATGAGAAAGAACCATTTGTTTGAGTTTAATGCTAAAAAACTA