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Detailed information on CNT30709924


BLAST search results

BLAST vs Swiss-Prot:
sp|P38417|LOX4_SOYBN, E-value = 5e-110

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30630144Glycine maxVigna unguiculata68.9996.1787.42652forward

Expression of CNT30709924

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MAYPSNPHDPPLQVLSTKLGARGLFEVPQLTCSRMRHILPPKT*

>peptide 2 (29 aa)
MARHQMSSSHHHLSAQGRTHQMRALIKFL*

Sequence

>CNT30709924
AATACAAGTACATTCAGCCACTCCAAATACATAACTTAAACATACACAACTGATGAAGGAATCAGATTCCTTCTGTTTCACATTTATTTAAAGGCAGGGA
CAGTACTTCAGCAACCATAGAGCCCTTAGATAGAGATACTGTTGGGAATTCCTCTGAAAGTCAATCCCTCCTCACTAGAAGGATAGAGCAAAGTGTAAGG
CATTTTAGCCGGCCCATAGCGGTTTCTCAATGTCTCATCATTGTTCTTCTCTATAAGCTTCTTTTCAATCTCTTCAAGATTCTTTCCAAACCTCTTAAAG
GCCTCTAATGGCCCGGCATCAGATGTCCAGTAGTCACCACCATCTCTCTGCCCAAGGTAGAACTCATCAGATGCGTGCCTTGATAAAATTTCTATAACTG
TAAGGTCAATGAGGGTCTCTTTCTTGCAGTAATAGTCTTCAAAAACTCCTTCTCAGGGTTCTTAGCCAACGCATCATATTCAGGAGACCCTTTCTCAGGC
ATGAATCTCCTGCTAATAGTTGGCCTATTCAGGATTAAACCTCCATATGGATACTGTCCAAAGTTAACAACAGCATGAAGAGCTGAAGCAATCCATAGCG
GAAGCTTCAACCAACTCTTCACGAGTTTGCATCTTTTGCCACCATGGCTTATCCTTCAAATCCCCATGACCCACCTCTACAAGTTCTTTCCACCAAGCTT
GGAGCTCGGGGTCTTTTTGAAGTTCCTCAGCTGACTTGTAGTAGAATGAGACATATTCTTCCACCCAAGACTTGATAGCATCCCATATCTCTAGCCCATC
AGAAGCATAAGGATAGTCCTCAATCAAAAGTCGAACTCCATGGGGAGCAGATGGATCCTTAATAGCAACTCCTCTGAATTAAAAGCACCCAAATAACATT
GATTAGCACAAGAGTTATATCAAGCCTGAAGCCTTTTTTCTTCTT