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Detailed information on CNT30630144


BLAST search results

BLAST vs Swiss-Prot:
sp|P27481|LOXB_PHAVU, E-value = 7e-126

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30709924Vigna unguiculataGlycine max96.1768.9987.42652forward
CNT30620387Vigna unguiculataCajanus cajan35.8434.3782.3243forward

Expression of CNT30630144

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAQHQKSKSHHHLSLQGRTHQMCALTRFL*

>peptide 2 (35 aa)
MHLWPPCLIFQITMTHLNKFFPPSLEFRVLLKCLI*

>peptide 3 (94 aa)
GNFTTTIQTLDRDTVGYSSEGQSLLAGRKEKSVRHFSWPCAVSQCLIIVLLHKLLFDLCKLLPEPLKGLQWPSIRSPKVTTISLSKVELIRCVP*

>peptide 4 (40 aa)
MPYLSNHHDPPEQVLSTKLGVQGPFEVPHLICSRMQHTLPP

>peptide 5 (61 aa)
MIVRSIRVSFFPVIVLKNSFSGFLPNATYSADPFSGMNLLLIVGRLRIKPPYGYCPKLTAA*

Sequence

>CNT30630144
TGGAAATTTCACCACCACCATCCAAACCTTAGATAGAGATACTGTTGGGTATTCCTCTGAAGGTCAATCCCTCCTCGCTGGAAGGAAAGAGAAGAGTGTA
AGGCATTTTAGCTGGCCCTGTGCGGTTTCTCAATGTCTCATCATTGTTCTTCTGCACAAGCTTTTGTTCGATCTCTGCAAGCTTCTTCCCGAACCTCTTA
AAGGCCTCCAATGGCCCAGCATCAGAAGTCCAAAAGTCACCACCATCTCTCTCTCCAAGGTAGAACTCATCAGATGTGTGCCTTGACAAGATTTCTATGA
TTGTAAGGTCAATCAGGGTCTCTTTCTTTCCAGTAATAGTTCTCAAAAACTCCTTCTCAGGGTTCTTACCCAATGCAACATACTCAGCAGACCCTTTTTC
AGGCATGAATCTTCTGCTAATAGTTGGTCGGTTAAGGATTAAACCACCATATGGATATTGTCCGAAGTTAACAGCTGCATGAAGAGCTGAAGCTATCCAT
ATCAGGGTAGTAGAGACTTCAACCAAATCTTCACGAGTATGCATCTTTGGCCACCATGCCTTATCTTTCAAATCACCATGACCCACCTGAACAAGTTCTT
TCCACCAAGCTTGGAGTTCAGGGTCCTTTTGAAGTGCCTCATCTGATTTGTAGTAGAATGCAACATACTCTTCCACCC