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Detailed information on CNT30709509


BLAST search results

BLAST vs Swiss-Prot:
sp|P27480|LOXA_PHAVU, E-value = 3e-68

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30176589Glycine maxVigna angularis21.6749.2789.63135forward

Expression of CNT30709509

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MITANVNQILKSVQLRPPWLVFQVTVTLLNSFLPPSLEF*

Sequence

>CNT30709509
GGTGACATAGAGAAATTTGATTTGACATTCATAGATCAGAATATCAGACTTACATACGGGTGAACATGATACGGGTGAACATGATAGGAGCACAATACTA
TACATAAAAACTGACACAACACCCTATTAGATATGAAAAACTAGATAGCATCCAATTACAAAACTTAAGCATACATAAGAAAATTATGCACACATAAGTT
TGCACGTTTATTTGTCAATGAGAGGGCATCTGCGCCGGTCCATTACGGTTCCTAAGGCTTGAATTCTTGTTCCTCCCTGAGATTTTGTCCTCAATTTCCT
TCAGCTTGTTTCCAAACTTCTTAAAGGCTTGAATTGCCTTTGTGTCATCAGTCCAATTTGGATTGTCCCTCTGTCCAAGGTAGACCTCATCAGAAGCATG
CCTTGACAATATCTCTATCACTGTTAGGTCCACAAGGGCCTCAGTCTTTCCTGTAATTGTTCTCAAATAAGCCTTTTGATGATTACTGCAAATGTGAATC
AGATCTTGAAGAGTGTTCAACTTAGGCCACCATGGCTTGTCTTTCAAGTCACCGTGACCCTTCTCAACAGCTTCCTTCCACCAAGCTTGGAGTTCTGAGT
CTTTCTTAACTGCATCATCCGTG