CANTATAdb - search

Detailed information on CNT30708325

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30145848	Glycine max	Medicago truncatula	24.09	11.04	81.82	132	forward
CNT30724813	Glycine max	Lupinus angustifolius	21.72	35.31	87.39	119	forward

Expression of CNT30708325

Peptides detected in this lncRNA

>peptide 1 (82 aa)
MGLDCNFHHHLRVVMELDHSFHHQGELMGLDCNFHHLHVTEIHDEMVIHDEMVIHDESDVVSFHVHYSQSHDLESSMNLQEVK

>peptide 2 (38 aa)
CNVVKRSRNLLACTSEGSWGRKVRGCGGDSGGAWINWG*

Sequence

>CNT30708325
GTGCAATGTAGTGAAAAGAAGTAGGAACTTACTTGCATGTACCAGTGAAGGGAGTTGGGGAAGGAAGGTAAGGGGGTGTGGAGGGGATAGTGGGGGTGCC
TGGATCAATTGGGGTTGAAGGTGGGCTCACAGTGATTGGTGTTGGGGGGCTACCACCTCCATAAGTTGGTGGTGAGTTATAGTACCCACCTCCTCCCAAG
GGAGGGTTTGATGGGGTTGATGGTGTTGTTGGGACTGAGGGTGTTGGAGTAGAGGGGTCTTGTGGTGGTGTTCCACAGTTGCTACCTGAGGGTGTTGATG
GGGTTGGATTGTAACTTCCACCACCACCTGAGGGTGGTGATGGAGTTGGATCATAGCTTCCACCACCAGGGGGAGTTGATGGGGTTGGATTGTAACTTCC
ACCACCTCCATGTGACGGAGATCCATGATGAGATGGTGATCCATGATGAGATGGTGATCCATGATGAGAGTGATGTGGTGAGCTTCCATGTCCACTACTC
CCAGAGCCATGATCTGGAGAGCAGTATGAACCTTCAAGAAGTAAAAGC