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Detailed information on CNT30705085


BLAST search results

BLAST vs Swiss-Prot:
sp|O23310|NFYB3_ARATH, E-value = 1e-25

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30717318Prunus aviumMalus domestica golden5.8230.3790.7765forward
CNT30327130Prunus aviumAsparagus officinalis9.523.485.85106forward

Expression of CNT30705085

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MEGFEFWLNYEELGSERERRREREREREREWLVWERMS

>peptide 2 (89 aa)
MKPASAVHVSLMLMLMLMLMLLLLLLLLLHALPIYPSSSTPTTTLVPNPTIPATSTRVLVTRGHAALLPLHLPEPLQINLERLHVLLEP*

Sequence

>CNT30705085
CCTCTACTCATATGATTGACTCAAATCAAAATATTTATACCACAATCTACTCAAATTATATTCTCTCTATATAATCCCAAATTACAAACTATTTTAGTAA
TAAATAAAAATAAAACACTTCTGCAAAAGCACTAATAAGTAACAAGTAGGAGTTTTACACAGACACTGTCCTCAATTAAGAAAGACTCTAAGCAAATAAT
TAGCAATCAAATTATAATTTATAAAAGGACACCCAAAGCAAATAGCCACAGAGAGCAGAGAGTCCACTATAATTATCTGGGTCTACCCATGTTAGATCCG
GGCCCACCCTTCCCCAACCCAACTCCACTCACACCCATCTGATGAAACCCGCTTCCGCCGTACACGTGTCCCTGATGCTGATGCTGATGCTGATGCTGAT
GCTGCTGCTGCTGCTGCTGCTGCTGTTGCACGCACTGCCAATATACCCCAGCTCCTCCACTCCCACCACCACTCTCGTACCCAACCCCACCATTCCCGCC
ACCTCCACTCGGGTCCTTGTCACGCGCGGCCACGCTGCTCTTCTCCCCCTCCATCTCCCTGAACCTCTGCAGATAAACCTTGAGAGGCTCCACGTACTCC
TCGAACCCTAACGTCGTCATCGCCCAGAGCAAATCATCGCCGTTGATCGTCTTCCGCTTCTCCCTCTGGCACTTGTCCGAGTCCGCCATTGAAGAAGCTC
TTCTTTTCTTCTCTTTTTTATTCAAATTTTAAAATAAATAAAAATACTTCTTTACTAATTATGGTAGAAAAATCCAGAAATTGACTTCACATGCTGAAGC
CGTCGATCAAAAACTATGGTAAGAATCGAAATTTGAAGTTACAAATTCAGCTGAAATTTCCAGGAATTGCAAAATGAAGCTTCCAAGTTTGCAAGAAATG
AGTGAGTATTTGGATTTTGGTTGAGAATTTGAAATTCAGTGAGAAGAGAGACACAGGAAGACGAAGAAGAGTATGAGATTCCGAAAATTATGAAAATTTA
AAATGGAAGGGTTTGAATTTTGGTTGAATTATGAGGAATTAGGATCAGAGAGAGAGAGAAGGAGGGAGAGAGAGAGAGAGAGGGAGAGAGAGTGGTTGGT
TTGGGAGCGAATGAGT