Detailed information on CNT30704364


BLAST search results

BLAST vs Swiss-Prot:
sp|P25251|CYSP4_BRANA, E-value = 3e-49

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30559660Prunus aviumActinidia chinensis5.1150.4381.2117forward
CNT30653584Prunus aviumRosa chinensis10.8832.8585.54249forward

Expression of CNT30704364

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MIDMSRADDRVKIAKRRTAMVDEDLYGPMFLLCSVFVY*

>peptide 2 (39 aa)
MQMLKIQAEERFCDIKGRKLTELYNWKSLPPPSMATAIG*

>peptide 3 (31 aa)
MVTLFRDLVTPRAKTPGSPGNCMIRVFSRSS*

>peptide 4 (37 aa)
MGLTTPSFLQSTESGNESPTRGAYRSLLVFRLESLFF*

>peptide 5 (51 aa)
MRPPLHPSLYVLSQSTSSCSDSERRSPVTSLLIPSTEQIVANAQQLPSTTK*

>peptide 6 (46 aa)
KLTGAVPETEEMDQGSGGSGHSLLDKKPPLQFHIFHVRCCPGYAPS*

>peptide 7 (61 aa)
MWVAINKSQGPTSVSIARSPWAHGVISSQQKAQEESLVSRTAIGNKIPPSDIFYFIFRNIQ*

Sequence

>CNT30704364
CAAACTGACGGGGGCTGTACCGGAGACGGAGGAGATGGACCAGGGTTCGGGGGGTTCAGGCCACTCTTTACTGGATAAGAAGCCTCCATTGCAATTCCAC
ATATTCCATGTGCGGTGTTGCCCAGGTTACGCTCCATCCTGATGTAGCCTTCCTCTCCCCAGCTGCCACCCCATGAATTTCTCACTATCCAGTAATCAAC
TCCTTTGTCTGTTCCATATCCCACAACTGTAACACCATGGTCCAATGATGTTCCACACCGTCCCGTAAATACACCCTGAAATAGCATTTGAAACAAAGAA
ACAAATTAGTTCACTCGTGTTCGAATTGTCAGACAGCATAAGTTTGGTAAGAGAACATTAATCATTCTTCGATGACAAGAAAGTCTGTACGTTAATAATT
AACAGGAGAAATGATAGGCTAACCCAATTGATGCAAATGCTCAAAATACAAGCAGAAGAAAGATTTTGTGATATAAAGGGAAGAAAACTTACAGAATTAT
ATAACTGGAAATCCCTGCCACCTCCTTCAATGGCAACAGCAATTGGCTGATTGGAAACAGCCTTTTGCAATGCTTTCTCATCGTATGCAGGAACATCTTC
ATAATCATCAATGGAAACCACCTTGGCATTTTTCTGCAAAGACAACAAAGGTATGAGAATATAGCTAAAAAATTTCAGCCATCTGTTCTGTTTTTGTTTA
AAACATTAAATTACAAAAACAAAACCAACCCTGTAGGTGTCACAGGTGGCATCATATCCTTTGTAAGGATAATCCTCTTCACTGTCAATTCCACCATTGC
TGATGATGAACTCGAAGGCATAATCCATGAGACCTCCATTGCATCCTTCATTGTATGTTTTGTCACAGTCAACCAGCTCCTGCTCAGATAGTGAGAGGAG
ATCTCCAGTCACTAGCTTGTTGATCCCTTCCACCGAACAGATTGTAGCGAATGCCCAGCAACTCCCTTCAACAACAAAATAATACTCGATGATTAACTTA
ATGACATAAATTAAGCTCACATTAAATCAGCAAATATAATATCTAGGAGGAATATCTGTTATCTATTTTTGTTTACGCCTTTGGTGTTGGGCTTTAAGAC
CTATGTGGGTCGCTATTAATAAAAGCCAGGGGCCCACAAGCGTGAGCATTGCGAGGTCCCCGTGGGCACACGGCGTAATTAGCTCTCAGCAAAAAGCTCA
GGAAGAATCATTGGTCTCAAGAACAGCCATAGGCAACAAGATTCCTCCGTCAGATATTTTTTATTTTATTTTCCGAAATATACAGTAAGCAATATTCGAA
TTAGATCCTATGGTCACACTTTTCAGAGATTTGGTAACCCCACGGGCCAAAACTCCAGGAAGTCCTGGTAACTGCATGATCCGCGTGTTCTCAAGGTCCA
GCTGAAAGCCTTCGACTCAGCTGTCAGCCTCGTCACCAATTATTATTGGCGGTCTAATTGAATAACCAAAACATGATTTTTAAGCCAAAACCCTTTGATT
AAGCAAACAACCAATCAGATTATCAAAGTCAACTACTCCCTAATCACAAACCTTTGCTCTATCACCAAGCAAACCCAAAAGTCTAGAGGGAAAATGACCA
CGCAACATCACCAAACGTCAATGATTTATTGCCATGACAAGGAGTCTGCACCTTAGCATACAAGTTCTAATCTCCCTCCCCGTAAATTAGATTAATTTAG
ACTATGACTTACAATGAAAAATACTAACAAACATTGGAAAATTAAATAAATACTAGAAGTATTAAAAATTAAAAAACAGAGTAGGAAAGTTGAAACTTAC
CGCAGCTCCCTTGGTCTTTGATGGGGTTGACTACGCCCTCCTTCCTCCAATCAACGGAGTCGGGCAACGAGTCGCCGACACGTGGCGCGTACCGGTCGCT
CTTGGTGTTCCGGTTGGAGAGCCTCTTCTTCTGAGCTCGGGTCTTGGTGCCCAGGAAAGTGGACCGGTACTCGTCGTTGGACAGATCGGCGAACCGGTTG
TCCTTGAAGATCTGGAACCGGCTCTCCTTCTCCCCCAATCCGTTGTAGGCTTTACCGTGCTTGGCCAGCCACCCTTCGTATATTGACATCACCTCCTCGT
CGGTCCTCCAGCTCGACTTCGACTCTCCGACGACGTTTTTGTCGTCGTAGGAGATGATCGACATGTCGAGAGCCGACGACAGGGTGAAGATCGCGAAGAG
GAGGACCGCCATGGTCGACGAGGATCTGTACGGTCCCATGTTTTTGCTGTGCTCTGTGTTTGTTTACTGAGAAACAGAGTGAAGGAAGT