Detailed information on CNT30702077


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30606094Quercus lobataGossypium raimondii10.1538.9582.43148forward

Expression of CNT30702077

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MSFYVSYFLWHHQPSLKLTQKSELELALRKTKLGLSRLQAKYMGHDQKLLQCLSLFLILRNLSL*

>peptide 2 (37 aa)
MHFFFLPQIKLRVLVSHIVVSEFSFFCILFIFIPKNQ*

>peptide 3 (38 aa)
MMSLDLSQKIKSPIKKSNLMFDFDAFFFFTSDQVKGFG*

>peptide 4 (36 aa)
MLIDSDDFTFIHLLGGGGGGKARCTTVWYKAYPYFI*

>peptide 5 (32 aa)
MLCFVLVIIFKMLFHYKIVFPVRHWLFNSWPQ*

Sequence

>CNT30702077
ATTTGAATGATCAAGCTTTAGAAATAATTAATGGTAAACTATGATGTCTTTAGACCTGAGCCAGAAGATAAAGAGCCCAATAAAGAAGAGCAACTTGATG
TTCGATTTTGATGCATTTTTTTTTTTTACCTCAGATCAAGTTAAGGGTTTTGGTTAGCCATATTGTTGTTTCTGAGTTTTCTTTCTTTTGTATATTGTTT
ATTTTTATACCTAAAAATCAATAGTTGTTCTTAAAAATGCTGGTTTGAAGAATGAATGATTTCCCTTCTCTAGCCCTCACTAAACAACCTTAGAAGGGAT
AGCTAATGTGTTCCACTAATTGAACAGGGTTCTTTGGTCGGTCTACTACCCCTAGATGCCAAAGGTGTCTTGGGATGATCTCCTAGCTCCTACAAGGTGG
AGATGATGGGACTGGCCCATGAATTTTCCTTCCTTTTGCCGCATTTCTCTCTAAGTATTGAAGTTGGCATAAGTTGTTGACAACCAAAAATATGTCAGTA
TTCTCTTCTCATCAGCCTTGTTGTCTTAACTAAGAGGCCAACTTGTTTGGGTGCCCCAGTTCATAGTAAGGTTCGGAGGATAATTCCCTACAGTTAGTAG
ATAAGGTGTTGGACATATATCTTGGTAACTTGACTTATATTTGTTGTTATTCAATTAGTAACATTTGGTTTAAACATTAACTGTATTACTAAAAAATATG
ACTTTAAATTTCTAATAATTAAATCAGTTATAAATAACACTGACGTGCAATAGTTTGAAGATTCACTATGTTGATAGATTCTGATGACTTCACATTCATT
CATCTTTTAGGGGGGGGGGGGGGGGGGAAAGCAAGATGCACAACAGTGTGGTATAAGGCATATCCTTACTTCATTTGATCCACCTGAGTGGCTGGATATA
TACATGACCATGCTAGCTTGTTAGAACTTCTGACAAAAGGGTAAGTTCTGATTCTTGTGAATGAGTTGGAGCAATTCTAAGATTGATTATACAGAACACT
AACTAAAAATAGCATACACAAGTTCTACTCAGTGTTGCACAAGCACATCTAACAATATAGCCTCTCCAACCATGTCTTTCTATGTCTCATACTTTCTTTG
GCATCATCAACCATCATTGAAACTCACTCAGAAGTCAGAACTAGAACTTGCCCTTAGAAAGACAAAACTGGGACTCTCAAGATTACAGGCCAAGTATATG
GGTCATGATCAAAAGCTTTTACAGTGTCTATCCCTTTTCTTGATATTGAGAAATTTGTCATTGTAGCTCATTGTATATAAATAACATTTATCAGGAATGC
TTTGTTTTGTACTTGTGATCATTTTCAAGATGTTGTTTCACTATAAAATTGTGTTTCCTGTTAGACATTGGCTTTTTAACTCTTGGCCACAATGATTAGA
CTAATAAAAAGGTTATGGATGGATTTGCAGTTCATTCTGATGTACAAATCACCTTAGC