Detailed information on CNT30695333


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT001145, E-value = 5e-54

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3017992Oryza sativaZea mays78.9925.5885.11188reverse complement
CNT30577716Oryza sativaOryza barthii61.7611.0493.2147reverse complement

Expression of CNT30695333

Peptides detected in this lncRNA

>peptide 1 (42 aa)
SIVFISLLELVYRLDRRPCHKIEIKGLPQAYSSKIIETGKEK*

Sequence

>CNT30695333
TTAGTATAGTTTTTATTTCCCTATTAGAACTTGTTTATAGACTGGACAGGCGCCCGTGCCATAAAATAGAGATAAAAGGATTACCACAGGCTTATTCATC
AAAAATTATAGAGACAGGAAAAGAAAAATAAATTTCTATCAAATCAATAGAAGGAAAGATCCTTTACCAGATTTGAATTCCACCCTCCTTCAAATAGGAT
ATGCTCTAAGTCCCTAGACTTCCCTATAATAACTGCAA