Detailed information on CNT30693046


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676260Oryza sativaSetaria viridis38.844.194.37142forward
CNT30523704Oryza sativaSetaria italica47.5447.894.83174forward
CNT30352741Oryza sativaEragrostis tef35.5220.693.08130reverse complement
CNT30585154Oryza sativaEchinochloa crusgalli35.5241.1492.31130forward
CNT30551083Oryza sativaOryza brachyantha37.9822.291.37139forward

Expression of CNT30693046

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MAEIDWRAKSPNLLELVVLVDGLGDVPGPPPRSPRNPRRRRPGTPSPSPAAGSTSPWPSTSTGTCSSRTP

Sequence

>CNT30693046
GCAAAAAATACCACTAATCCCATCATTTTAATCCACTAATCAAGTTTTATTTCATTTGCAGGAGATGATCCACAACAACTGGAGCATATAACGCATAAGA
GCACGAGCTAAGTTACTAGTAGAAGATAGCAGAAGCACAAACCATCGCCATGTCATATGGCTGAAATCGATTGGCGTGCCAAATCCCCAAATCTACTCGA
ACTTGTAGTGCTTGTCGACGGCCTCGGCGACGTCCCAGGTCCCCCGCCGCGATCTCCACGAAATCCTCGCCGGCGCCGTCCGGGAACACCTTCACCTTCC
CCTGCAGCAGGTAGCACGTCTCCTTGGCCGAGTACGTCCACGGGAACTTGCTCTTCTCGCACCCCC