« Back to Oryza sativa search


Detailed information on CNT30691791


BLAST search results

BLAST vs Swiss-Prot:
sp|Q01595|CCDP_MAIZE, E-value = 1e-41

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596930Oryza sativaOryza meridionalis71.9553.3394.92472forward

Expression of CNT30691791

Peptides detected in this lncRNA

>peptide 1 (82 aa)
MLRLMPRMLALMAVQRQTAASRSTRPPSNGQHCSLSGTPIFSFSRLSTLAHTLSFSASIGHLFPPPDGGDGGGVTGGVGVGQ*

Sequence

>CNT30691791
GCAGATAGATAGATAGAACGTACGTACACTGGAGGAAACTTTTATTTGACAGTACGCATTAAAATAACAAGATACATATATTAGATGATCGATCTGATCA
TCAATAATCACACTGATAGATCGAGATAAGTATATATGTATGACACAACTGCAACACACAGACTAAGCCATGCAAAGCTTAAGCCTTAATTAGGTAGCTA
GGGTTGTGGTGGTAATGAAGATTAAGAATCAGATGAGTGGGCAGGAGAAGTCGGAAGGGCAGGTCTTGTGGCAGTAGTTGAGAAGGAGAGAGAGATCGAC
GGGGATGTTGAGATTGATGCCGAGGATGTTGGCCTTGATGGCGGTGCAGAGGCAGACGGCGGCGTCGAGGTCGACGAGGCCACCCAGCAACGGGCAGCAC
TGCTCGCTCTCCGGCACGCCGATCTTCAGCTTCAGCAGGTTGAGCACGTTGGCGCACACGCTCAGCTTCAGCGCGTCGATCGGGCACTTATTCCCTCCAC
CCGACGGCGGCGACGGAGGCGGCGTCACCGGCGGCGTCGGTGTGGGGCAGTAGGGCTCGCATGCCTGCACTACTGCACCCATCTGCATGGTGAAGAGCAC
ATTGAGGGCAAGGAACAGCGCACAAACCTGCACCTTCTTGCCGGCCATCTTAATTA