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Detailed information on CNT30691154


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT006645, E-value = 2e-100

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30555304Oryza sativaOryza glaberrima41.3512.2198.26172forward
CNT30577709Oryza sativaOryza barthii53.6110099.1223forward

Expression of CNT30691154

Peptides detected in this lncRNA

>peptide 1 (29 aa)
VLHGARAPLLKLSIYPIQMSMKLFQLLRY*

Sequence

>CNT30691154
GGTGCTCCATGGTGCCCGGGCACCATTGTTGAAATTGAGTATATACCCAATTCAAATGAGTATGAAACTTTTTCAATTACTTAGGTATTAACATTAACTA
CTTTACTAACTAGTTTAAAGCAAGTTTGAACTGAATTTGAACTTGTTTTTGTTAGATTTTGATTCTAGGTATATAGCATCCATACATATAATTAGTTAGG
TATGTAATCATGGATTGTGAAATAAAGTTAAATTTGAGTTGTTTTGTTGATAGGTATAGGTATGAATCGAATTCTTATAACTAGGTATATACTCACAATT
TGAAAATTTTGAAAAATTTGAGTGATTTTGTGCATTTGAAACCATGGTGCCCGGGCACCATGGTGCCCCATATGAGTGTCCTATATATATATATATATAT
ATATATATATATATAT