Detailed information on CNT30689777


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 1e-155

BLAST vs NONCODE:
NONMEST001181, E-value = 5e-132

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30583334Triticum urartuEchinochloa crusgalli50.3833.5389.6721forward

Expression of CNT30689777

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSEDSTSSVMVLPVRVLTKICMPPLRRSTRWRVDSFWML*

>peptide 2 (61 aa)
MRRCWSGGIPSLSWIFAFTLSMVSEDSTSSVIVLPVRVFTKICIPPLRRSTRWRVDSFWML*

>peptide 3 (34 aa)
RRFRNCRSTNSKKTGTRSGLIYSFKFIQICCSTA*

>peptide 4 (39 aa)
MFKFDHKLKRSVNIYDFQTRTDAQVQIPSSFDTTRYNIS*

>peptide 5 (73 aa)
EGLGTAEVQTAKKQAHVQGSFIHSSSSKSAAAQHKVQTQPDITLDHSTVATKNKTRRGHADNHNGVHRKTTDS*

>peptide 6 (62 aa)
MARHLLATTEAEHQVKGGLLLDVVVRQSAAILKLLTSKDEALLVWWDTLLVLDLRLHIVDGV*

>peptide 7 (68 aa)
MRRCWSGGMPSLSWIFALTLSIVSEDSTSRVMVLPVRVFTKICICKHKVYQNHNKALVIMKLQNIKHI*

>peptide 8 (31 aa)
MIFRQELMHKYRYLQVLTQQDTISVKSTVLL*

Sequence

>CNT30689777
GCGAAGGTTTAGGAACTGCAGAAGTACAAACAGCAAAAAAACAGGCACACGTTCAGGGCTCATTTATTCATTCAAGTTCATCCAAATCTGCTGCAGCACA
GCATAAAGTTCAGACACAGCCAGATATAACGCTAGACCACAGCACGGTAGCAACAAAGAACAAGACCAGACGAGGACACGCTGACAATCACAACGGAGTA
CACAGAAAGACAACCGACTCGTGAGCCCAGAGACATAAGCAGCTCCATGGCCAGGCACTTACTGGCCACCACGGAGGCGGAGCACCAAGTGAAGGGTGGA
CTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCC
TGGATCTTCGCCTTCACATTGTCGATGGTGTCTGAAGACTCGACCTCGAGCGTGATTGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATACCACCCC
TGAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAGACGCTG
CTGGTCCGGTGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCAATGGTGTCTGAAGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGG
GTCTTGACGAAGATCTGCATGCCACCCCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGACCGTCCTCAA
GCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCAGAGGACTCGAC
CTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCTGCAAACATAAAGTGTACCAAAACCATAATAAGGCACTCGTAATCATGAAA
CTGCAGAACATAAAGCATATATGAACCAGAAGGCCATGATCCAAGAGAGACGAAATTGTAACTATGTCTTGAACTATTAGATAGCAGATTGATGTTCAAG
TTTGACCACAAGCTAAAAAGATCAGTTAATATATATGATTTTCAGACAAGAACTGATGCACAAGTACAGATACCTTCAAGTTTTGACACAACAAGATACA
ATATCAGTTAAATCAACAGTACTACTGTAAGCAAACACAATTGACTCTTAAGAGCAGAACCGGTGCACAAGAACGGATCCTCCAAACAACTACTAGGCCC
AACAACTAACATAGGAACCAGTTTTGCTAAAGCACATCTAGGTGTGCCCAAGTATGCAACTCAGGTATATCCGTTCACAGATCAAGCATAGGTGCAACAT
AAAAAGGCTCATGAGCGCCACAAAGTCTGAG