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Detailed information on CNT30583334


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 3e-152

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-110

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30528740Echinochloa crusgalliEucalyptus grandis31.1279.1787.44669forward
CNT30305252Echinochloa crusgalliTriticum aestivum31.8180.0990.2684forward
CNT30226205Echinochloa crusgalliHordeum vulgare31.2665.1290.03672forward
CNT30398794Echinochloa crusgalliTriticum turgidum25.7268.1989.69553forward
CNT30242486Echinochloa crusgalliAvena sativa32.2867.3191.35694forward
CNT30669573Echinochloa crusgalliTriticum dicoccoides32.3370.8589.64695forward
CNT30445203Echinochloa crusgalliSaccharum spontaneum32.3353.4287.48695forward
CNT3067522Echinochloa crusgalliLeersia perrieri31.9155.586.44686forward
CNT30652285Echinochloa crusgalliRosa chinensis32.0556.6186.65689forward
CNT30689777Echinochloa crusgalliTriticum urartu33.5350.3889.6721forward
CNT30722025Echinochloa crusgalliTriticum spelta31.8177.288.45684forward
CNT30576634Echinochloa crusgalliOryza barthii32.4765.0590.11698forward
CNT30603673Echinochloa crusgalliOryza punctata32.1969.9787.43692forward

Expression of CNT30583334

Peptides detected in this lncRNA

>peptide 1 (47 aa)
PQDNMRFRNQQNALAQEVQGSLIHHISSTKQQMFTNHQTDIGLTSNM*

>peptide 2 (50 aa)
MPSLSWIFAFTLSMVSEDSTSRVIVLPVRVFTKICIPPLSLSTRWRVDSF*

>peptide 3 (36 aa)
MVSEDSTSRVMVLPVRVFTKICICKHQGTKGRVKPP*

>peptide 4 (43 aa)
MNRNRKKTRNIYQKVIERAYLERIGRGCFAFASIARREVLRRIG

>peptide 5 (29 aa)
MHLHKKFRVHLFITLVQPNSKCSQTTRLT*

>peptide 6 (33 aa)
MNLQQTTPSQSADLHIYPRNRQQIGRERIDYTA*

>peptide 7 (54 aa)
MMSPTGYNNPNNIETIPVYPIQRNIDKTTVYPIRRDKYHSLSYDLDSEEPIKNL*

>peptide 8 (53 aa)
MPSLSWIFAFTLSMVSEDSTSKVMVLPVRVLTKICIPPLSLSTRWRVDSFWIL*

Sequence

>CNT30583334
CCACAAGACAACATGAGATTCAGAAATCAACAGAATGCACTTGCACAAGAAGTTCAGGGTTCACTTATTCATCACATTAGTTCAACCAAACAGCAAATGT
TCACAAACCACCAGACTGACATAGGACTCACATCGAACATGTAAACAAAACAACTTGACCAGGACACCAACCACAGGACAGGCAGACAATCTTCATTGGA
AAGACACAGGAGGCACCAGACTTTGTGAACCCAGGGATAACAGCAGCTCCATGGCCACTTACTGGCCACCACGGAGACGGAGCACCAGGTGGAGGGTAGA
CTCCTTCTGGATGTTATAGTCTGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCC
TGGATCTTCGCCTTCACGTTGTCGATGGTGTCAGAAGACTCCACCTCCAAGGTGATGGTCTTGCCCGTCAGGGTCTTGACAAAGATCTGCATACCACCCC
TGAGCCTGAGCACCAGGTGGAGAGTAGACTCCTTTTGGATATTGTAGTCCGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGACGCTG
CTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCAATGGTGTCAGAAGACTCAACCTCTAGAGTGATTGTCTTGCCAGTGAGG
GTCTTCACGAAGATCTGCATACCACCCCTGAGCCTAAGCACCAGGTGGAGAGTGGACTCCTTCTGAATATTGTAGTCCGCCAAGGTACGGCCATCCTCCA
GCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATGGTGTCAGAAGACTCCAC
CTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATCTGCAAACATCAAGGGACAAAAGGAAGAGTCAAACCACCATAAACATTCAGC
TATACAGGACACAGAACATGACAATAGTGAAACTGATGAACTCTGAAGTCCGAACAGAAACTGATGAACTCTGAAGTTTGACAGAAGAGAATTAACATAA
TGAGCTGAATAAATTTGAAGCAAAAGAGAATGAACATCTCACAGCTCATCATCCTATGTTAACAGAATATGCTAACTAAATCTGGAGGAAAATCTTATTA
ACAACCTATACATGATATAGAACATTGCAACATTGAAACCAACCAATTCCGACTATTGAAACATGAAGCTATTAACTGAATAGAAAATCTAAATTTGAAG
AAAATCTATATTGGGTACTAACTGAACGGTTACATTTAACATTAAACTATCAAATTTTGACGACACATGATGTCGCCAACTGGATACAACAATCCAAACA
ACATTGAGACAATACCAGTTTATCCAATCCAGAGAAACATAGACAAAACCACAGTTTATCCTATCCGGAGAGACAAATACCACAGTTTATCCTATGATTT
AGATAGTGAGGAACCAATTAAGAATCTGTGAAGCCATATCTACATGAGCCCTTACCAGAACTGAACTAATTAATTCCACATGATAAAAAAAGCTACTTAA
TTCCACACCAATTCGGTGATCATCGCCAGTCATGTATGATCAAAAGCCACCAATCTAGACAAGCTACCAAGATTAAACAGCAATCAAGCTGTATTCCTGT
GCAGAGGACTACCTAGATTAATCGAACCAACAATCCCTAACCCAAAAGAGATGAACCATCACACGATTCAACATATATAAAGCCTGACCCAATCATGTCC
GGCTGCTCGATCACGCGCATGCCATAAAAATCCCAACCCTAACAGCAAATCAGGCAACCATATCATACCGATCACGAATACGACGCCTCAGCATGAATCT
ACAGCAAACGACCCCATCACAATCCGCAGATCTACACATCTACCCTAGGAATCGACAACAAATTGGACGCGAGCGCATCGATTACACAGCCTAATCGAAG
CCTAAACGAGATCCACGATGAACAGGAACAGGAAAAAGACGCGAAACATATATCAGAAGGTGATCGAACGCGCATACCTTGAGAGGATCGGGAGAGGCTG
CTTCGCTTTCGCTTCGATCGCTCGGAGAGAAGTTCTTCGACGGATTGGGA