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Detailed information on CNT30688036


BLAST search results

BLAST vs Swiss-Prot:
sp|P33626|TBA4_MAIZE, E-value = 7e-13

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30301189Triticum urartuTriticum aestivum22.613.894.69113forward

Expression of CNT30688036

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MRFREEMLLRAYTSSYVSSRLDLPYSPRFTLLLVVPRPLAPACFFCCTM

>peptide 2 (32 aa)
MLKTWGLLESTEKGRVRRLIGSSLPWSHDFPS*

>peptide 3 (52 aa)
MIFRVDGSFLCTPASRSATCAGNFTASSTASSLMARQTVTRPSGDSLLANNS*

Sequence

>CNT30688036
CTTGGATGCAGGGAGAGGAGACGCCCAACCATGGGCAAGCTCTACGTCGGCATCTGCCTTTGTAGCTTGGCCTAGGGTTAGCTGAATGCTAAAGACATGG
GGGCTGCTGGAGAGCACGGAGAAGGGCAGGGTCCGGAGGCTGATAGGCTCAAGCCTCCCGTGGAGCCATGATTTTCCGAGTTGATGGATCTTTCCTGTGC
ACGCCGGCATCCAGGTCGGCAACGTGTGCTGGGAACTTTACTGCCTCGAGCACGGCATCCAGCCTGATGGCCAGGCAAACAGTGACAAGACCATCCGGTG
ATTCGCTGCTTGCAAACAACAGCTAGTAAATCGGTCATCGTGGGGGCGGGGACATGAGATTCAGAGAAGAGATGCTGCTGCGTGCCTATACTAGTTCATA
TGTATCCAGCCGCCTAGATCTACCATACTCACCTCGTTTCACTTTGCTACTAGTAGTTCCTAGGCCATTAGCTCCTGCTTGCTTTTTTTGCTGCACAATG