Detailed information on CNT30686160


BLAST search results

BLAST vs Swiss-Prot:
sp|P27495|CB24_TOBAC, E-value = 2e-167

BLAST vs NONCODE:
NONMTRT001605, E-value = 9e-37

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30253100Triticum urartuAvena sativa82.8885.389.6702forward

Expression of CNT30686160

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAQRQWITSSSRFLAKVSGSAESPAVSHP*

>peptide 2 (97 aa)
MDHLQLPVLGESLGVSGKPGSVPPIVARKLTGQVARGLTGEWAEVEHTVGTVPWAAGGNLLRLCSGLAHGRGGEGHGGCRHWKAKMSVNCMGSQRDE*

>peptide 3 (31 aa)
MGCRRKPASPLQRSCAWSRRRGTWWLPPLES*

>peptide 4 (38 aa)
MPQGLRPSQEGQSCRLGRVGRRSHRVGRQQRGTPRRHP*

>peptide 5 (54 aa)
RASWRAQSQDTLLAGDKVGGKCPCIVVDGVGDVVSEVLKWAFACDDSLDKEAKH*

>peptide 6 (89 aa)
NAPHGEHSLKTPYLPGTKLVANAHALLLTGSAMWSARFSSGPLPVTIAWTKKPNIENMARRPFLISFTLSSANASGSSAKPRGSKLPPG*

Sequence

>CNT30686160
AACGCGCCTCATGGCGAGCACAGTCTCAAGACACCTTACTTGCCGGGGACAAAGTTGGTGGCAAATGCCCATGCATTGTTGTTGACGGGGTCGGCGATGT
GGTCAGCGAGGTTCTCAAGTGGGCCTTTGCCTGTGACGATAGCTTGGACAAAGAAGCCAAACATTGAGAACATGGCAAGGCGACCGTTCTTGATCTCCTT
CACCTTGAGCTCGGCGAATGCCTCAGGGTCTTCGGCCAAGCCAAGAGGGTCAAAGCTGCCGCCTGGGTAGAGTGGGTCGACGATCTCACCGAGTGGGCCG
CCAGCAACGCGGTACCCCTCGACGGCACCCATGAGCACGACCTGGCATGCCCAAATAGCAAGGATGCTTTGTGCGTGGACGAGGCTGGGGTTGCCGAGGT
AGTCGAGACCACCCTCGCTAAATATTTGAGAGCCCGCCTTGAACCAAACAGCCTCACCGAAGTTGACGCCATTGCGGGCGAGCAACTCAGGGAAGACACA
ACCAAGTGCCCCGAGCATGGCCCAGCGGCAATGGATCACCTCCAGCTCCCGGTTCTTGGCGAAAGTCTCGGGGTCAGCGGAAAGCCCGGCAGTGTCCCAC
CCATAGTCGCCAGGAAACTCACCGGTCAGGTAGCTCGGGGGCTCACCGGAGAGTGGGCCGAGGTAGAGCACACGGTCGGCACCGTACCATGGGCTGCCGG
AGGAAACCTGCTTCGCCTTTGCAGCGGTCTTGCGCATGGTCGAGGAGGAGAGGGACATGGTGGCTGCCGCCATTGGAAAGCTAAGATGAGTGTCAACTGT
ATGGGTTCTCAAAGAGATGAGTGAGTATGGAGATGATTTGATAGAAG