Detailed information on CNT30684892


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 1e-101

BLAST vs NONCODE:
NONMEST001181, E-value = 6e-87

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30721839Triticum urartuTriticum spelta89.5310098.98684forward

Expression of CNT30684892

Peptides detected in this lncRNA

>peptide 1 (30 aa)
KNRHTFRAHLFIQVHPNLLQHSIKFRHSQI*

>peptide 2 (61 aa)
MRRCWSGGIPSLSWIFAFTLSMVSEDSTSSVMVLPVRVLTKICMPPLRRSTRWRVDSFWML*

>peptide 3 (62 aa)
MARHLLATTEAEHQVKGGLLLDVVVRQSAAILKLLTSKDEALLVWWDTLLVLDLRLHIVDGV*

>peptide 4 (69 aa)
MRRCWSGGMPSLSWIFALTLSIVSEDSTSRVMVLPVRVFTKICICKHKKALASIRSETFLGSLGREDWMS

>peptide 5 (62 aa)
KKQAHVQGSFIHSSSSKSAAAQHKVQTQPDITLDHSTVATKNKTRRGHADNHNGVHRKTTDS*

Sequence

>CNT30684892
AAAAAACAGGCACACGTTCAGGGCTCATTTATTCATTCAAGTTCATCCAAATCTGCTGCAGCACAGCATAAAGTTCAGACACAGCCAGATATAACGCTAG
ACCACAGCACGGTAGCAACAAAGAACAAGACCAGACGAGGACACGCTGACAATCACAACGGAGTACACAGAAAGACAACCGACTCGTGAGCCCAGAGACA
TAAGCAGCTCCATGGCCAGGCACTTACTGGCCACCACGGAGGCGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGAGTGCGGC
CATCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCTGA
AGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATGCCACCCCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTC
TGGATGTTGTAGTCAGCAAGGGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCT
TCGCCTTGACGTTGTCGATCGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCTGCAAACATAAAAA
GGCCTTGGCTTCGATTCGATCGGAAACTTTCTTGGGGTCGCTTGGCAGGGAGGATTGGATGAGT