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Detailed information on CNT30684844


BLAST search results

BLAST vs Swiss-Prot:
sp|P12329|CB21_MAIZE, E-value = 7e-105

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30186677Triticum urartuSecale cereale73.0675.7993.67648forward
CNT30299798Triticum urartuTriticum aestivum99.1100.6997.04879forward

Expression of CNT30684844

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MSTTWQAQMARMLCACTRLGLPSAPSMAQRQWMTSSSRFLAKVSGSADSPAVSQP*

>peptide 2 (35 aa)
MQHLSVRTTQSQNGKKQRSTTTHMQQHPSAMKLSA*

>peptide 3 (44 aa)
MVMRPSPKGAALEAFTGVPAIAGEESAMVAAAIARCVLAGFCFG*

Sequence

>CNT30684844
ACAAGTAGTTAAGCAGAAGAACAGAGATGCCTTGATTGATCTGAAAAATAACCAGATACATTACACAAACACCATCTTGTAGTGTACACACACCAACTCC
TCATCTCGACTCGCCCTCACATGCAACATCTATCAGTCCGGACTACTCAATCTCAGAACGGGAAGAAGCAGAGATCGACGACGACACACATGCAGCAGCA
TCCATCAGCCATGAAGTTGTCGGCCTAGAGCTTGAGCTGACTGCGCTCACTTGCCGGGGACGAAGTTGGTGGCGAAGGCCCAGGCGTTGTTGTTGACGGG
GTCGGCGAGGTGGTCGGCGAGGCCCAGGGGGTCGAAGCTGCCGCCGGGGTAGAGCGGGTCCACGATCTCGCCGAGCGGGCCGCCGGCGACGCGGTAGCCC
TCCACGGCGCCCATGAGCACCACCTGGCAGGCCCAGATGGCGAGGATGCTCTGCGCGTGCACCAGGCTGGGGTTGCCGAGCGCGCCGAGCATGGCCCAGC
GGCAGTGGATGACCTCCAGCTCCCGGTTCTTGGCGAAGGTCTCGGGGTCGGCGGACAGCCCCGCGGTGTCCCAGCCGTAGTCACCGGGGAACTCGCCGGT
GAGGTAGCTCGGGGGGTCGCCGGAGAGCGGGCCGAGGTAGAGCACGCGGTCGGAGCCGTACCACGGGCTGCTGGACGCCGCCACCTTGGGCTTGCCCGCC
GTCTTGCGCATGGTGATGCGGCCCTCGCCGAAGGGCGCCGCCCTGGAGGCCTTCACCGGGGTGCCGGCCATCGCCGGGGAGGAGAGCGCCATGGTCGCGG
CCGCCATCGCGCGCTGCGTGCTAGCTGGCTTTTGCTTCGGGTGAGCTGAGGCTGGCAGTGGGAGGCGCTGGTGGTCGTTGGTGCTGT