Detailed information on CNT30684015


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30721681Triticum urartuTriticum spelta79.492.9398.96289forward
CNT30327267Triticum urartuAsparagus officinalis26.128.4491.5895forward

Expression of CNT30684015

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MRWYGWKKGRHISRKSRLRMVGITMSSSSLSSGVDGTDDPGTVTVPAIAAWPGSRSRALDLAVPGGGGRGGSRERCG

>peptide 2 (42 aa)
MAPTIRAQSPSLPLLPGRDLDLEPWISLFLEVVVGVGVERGVG

>peptide 3 (35 aa)
MHEVVRLEEGAPHLEEVEIADGRDHDVQLVLEQRR*

>peptide 4 (30 aa)
NLDLCRGKVRKELTKQSSSMVKTYFFLETM*

Sequence

>CNT30684015
CAATTTGGATTTGTGCAGAGGGAAAGTTAGAAAGGAACTTACGAAGCAGTCGTCATCGATGGTGAAGACGTACTTCTTCTTGGAGACCATGTAGCCGAAG
CAGCGGCACGCGGAGTCCTTGAAGGAGATGCATGAGGTGGTACGGCTGGAAGAAGGGGCGCCACATCTCGAGGAAGTCGAGATTGCGGATGGTCGGGATC
ACGATGTCCAGCTCGTCCTTGAGCAGCGGCGTTGATGGCACCGACGATCCGGGCACAGTCACCGTCCCTGCCATTGCTGCCTGGCCGGGATCTCGATCTC
GAGCCCTGGATCTCGCTGTTCCTGGAGGTGGTGGTAGGGGTGGGAGTAGAGAGAGGTGTGGGTT