Detailed information on CNT30683524


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30191518Triticum urartuSecale cereale7.6324.7783.9581reverse complement
CNT30663210Triticum urartuTriticum dicoccoides20.4310096.31217forward
CNT30573009Triticum urartuVitis vinifera4.9920.3888.6853forward

Expression of CNT30683524

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MISSHDPTKDPRAKGMYNDDIWIKLDTYAP*

>peptide 2 (31 aa)
CSWLDERSIAGFAIQRQVGSGELASIRPTPH*

>peptide 3 (42 aa)
YALGLTNGPLLASLSNVKWGRESWLQLGQHPIDNFTHTRSTR*

>peptide 4 (56 aa)
MRGKALARAEMSKMSLAPSRHFRTPGQKPHRRNLHIPGIPRRTHGRGYEMAELPLP*

>peptide 5 (58 aa)
MRGTGAHRRRRTGRWAAWILAASLRRRPRPMSGWGPATVSSHSLSRRPIPRPQLPDCR*

>peptide 6 (65 aa)
MGGVDPSGEFAEAAETDVRLGPRDGVVPQLVEEAHTSSPITRLPLRWMDRSEQPTTSLPKFPDLRE

Sequence

>CNT30683524
TATGCTCTTGGCTTGACGAACGGTCCATTGCTGGCTTCGCTATCCAACGTCAAGTGGGGTCGGGAGAGCTGGCTTCAATTAGGCCAACACCCCATTGACA
ACTTCACGCACACAAGGAGTACTAGATAAAGCAGCTCCATACTGGTACAGATCCATTTTTTGTTCTTCTACGAACAGAAAACAGAAAGGCGTCGCTATTT
TCTCTTGGAAGGCAAACCTTACAGCCTGATAGCTACACTTATCCGGTTGCCGCTGCATTTCAAAGACACCACATAAATGGTAACTTATCGAACACGATGA
TATCCAGTCATGATCCCACGAAAGACCCGAGAGCTAAGGGCATGTACAATGATGACATATGGATAAAATTAGATACATATGCCCCATGACAAAAAGTAAT
TTAAGGCACCTATATTAATTTTTTCTCTTTAATACAAGCTATCACTAGTGGGTCTTATTAAAAAATAAAAAATAAGGACTCTAGTACAAATGCATCTCTA
CTTTTCACTCTAACTTTTTCAGCTTTTATCATCGGATCACACTTTTTCTTTTCAAGCACCCGCCTTCCGGAGAGGATCCCACTTCCCTGTCCGAAACTAC
TTTACGTCATATCCGATCCTACATGGAATGCGAGGTAAAGCACTTGCCCGGGCAGAAATGTCCAAAATGTCCCTAGCCCCGTCTAGACACTTCCGAACTC
CAGGACAAAAGCCACATAGACGAAACCTACACATCCCGGGCATTCCCCGTCGCACACATGGACGCGGCTACGAAATGGCCGAACTGCCCCTACCGTAAAA
AAAATTAATGCGAGAAGTTGGATGAGGGGCACGGGAGCTCACCGCCGCCGGCGAACGGGGAGATGGGCGGCGTGGATCCTAGCGGCGAGTTTGCGGAGGC
GGCCGAGACCGATGTCCGGTTGGGGCCCCGCGACGGTGTCGTCCCACAGCTTGTCGAGGAGGCCCATACCTCGTCCCCAATTACCAGACTGCCGCTGAGA
TGGATGGACCGATCCGAACAGCCCACTACCAGTCTCCCCAAGTTTCCGGATCTGAGAGAAGG