Detailed information on CNT30682196


BLAST search results

BLAST vs Swiss-Prot:
sp|Q43139|F16P2_SACHY, E-value = 2e-16

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30557828Triticum urartuPanicum hallii44.1444.3491.8498forward

Expression of CNT30682196

Peptides detected in this lncRNA

>peptide 1 (43 aa)
WTLVSPARPVSLARSPRDSGCRLCSFSTCRVMVIRSVRNVSAA*

>peptide 2 (62 aa)
LDVGLAGEAGELGEVAARLRVPALLVQHVPRDGHQVRPERVRRVIHLPSPTPTLSPVRSLSS*

Sequence

>CNT30682196
CCTGGACGTTGGTCTCGCCGGCGAGGCCGGTGAGCTTGGCGAGGTCGCCGCGCGACTCCGGGTGCCGGCTCTGCTCGTTCAGCACGTGCCGCGTGATGGT
CATCAGGTCCGTCCGGAACGTGTCCGCCGCGTGATCCATCTTCCTTCTCCGACGCCGACCCTCTCTCCCGTTCGCTCGCTCAGCTCGTAGGAGAGTTGGT
ACGTGTTGCGGGCTTTGCTTGC