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Detailed information on CNT30681845


BLAST search results

BLAST vs Swiss-Prot:
sp|Q95H49|RR3_WHEAT, E-value = 2e-125

BLAST vs NONCODE:
NONORUT000960, E-value = 2e-108

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30358685Triticum urartuLactuca sativa16.8527.8491.67108forward

Expression of CNT30681845

Peptides detected in this lncRNA

>peptide 1 (40 aa)
FTPLISAFLVNSMAFFIAFRNETLFFNWKAIYSARMLGCL*

>peptide 2 (52 aa)
MTWIVSISFWISICVITSELEPESIFLLCVITSELESDSIFLFEPFFLFFCI*

>peptide 3 (36 aa)
MVFLGCTKSETKWIYFLSHIFLFYIFFTGNRNLRWI*

Sequence

>CNT30681845
TTTACTCCCCTTATATCTGCTTTTTTAGTTAATTCAATGGCTTTTTTCATTGCCTTTCGGAATGAAACTCTATTTTTTAATTGGAAAGCTATATATTCTG
CAAGAATGTTAGGCTGTCTATAAGGTTCTTTAAATTTTTTGATAGAAATATTAAATCTCTAGTTTACAGAGTTAATTTCCTTTTGTAGATCTTTCTCTAA
TTCTTCGATTGCTCCTTTTTTCTTTAATAAATTTGGGAATCCAATATGGATTATGACGTGGATCGTATCGATTTCTTTTTGGATTTCTATATGTGTAATT
ACTTCGGAACTTGAACCTGAGTCCATTTTTCTATTATGTGTAATTACTTCGGAACTTGAGTCTGATTCTATTTTTCTATTCGAGCCCTTTTTCCTATTCT
TTTGTATATAGTTCTTGATACAATCCCTTATTTTTTTATCTTCCTGTAGACCTTCAGAATAATTTTTTGGTTGTGCGAACCAAAAGGAATGGTGTTTTTG
GGTTGTACCAAGTCTGAAACCAAGTGGATTTATTTTTTGTCCCATATTTTTCTATTCTATATTTTTTTTACTGGGAATCGAAATCTTAGATGGATCTAAA
GGTTATTTAGATTTCTTTACTATATTTAGTACAATTGTTAT