CANTATAdb - search

Detailed information on CNT30680383

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30154378	Triticum urartu	Prunus persica	18.59	20.22	88.04	92	forward

Expression of CNT30680383

Peptides detected in this lncRNA

>peptide 1 (68 aa)
YLGSILQKDGDIDEDVSNQIKVGWKKWRQASGVLCDKKVPQKLKGRFYRTRIGNRRIHQLHLTCGMDA*

>peptide 2 (34 aa)
MWNGCIRMLCSAWNTIIKLKVPEIPKGIPSEKLP*

Sequence

>CNT30680383
TATTTGGGGTCAATCCTGCAGAAGGATGGTGATATCGATGAAGACGTGAGCAATCAAATCAAAGTTGGATGGAAGAAGTGGCGCCAAGCTTCTGGTGTCC
TCTGCGACAAGAAAGTGCCACAAAAGCTAAAAGGCAGGTTCTATAGGACAAGAATAGGGAACCGCCGAATACACCAGCTACACCTAACATGTGGAATGGA
TGCATAAGGATGTTGTGCTCTGCCTGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAAAGGCATACCATCAGAAAAGCTTCCTTGACCAATAG
GGTAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACG
ACTTTCCTGGAGAACCAGTAAAAACTTCTGCCACAAAGAACGGTTGTGATAAGAAACGCTCAATTTTTCTTGCTCTTGCTACAGTTAAACGATCC