Detailed information on CNT30154378


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30197557Prunus persicaPisum sativum97.828.7191.01445forward
CNT3088631Prunus persicaVigna radiata52.7534.8385240reverse complement
CNT3082983Prunus persicaBrassica juncea96.2618.2490.18438forward
CNT3017912Prunus persicaZea mays92.5358.885.04421forward
CNT30680383Prunus persicaTriticum urartu20.2218.5988.0492forward
CNT30416813Prunus persicaPapaver somniferum97.819.9489.89445forward
CNT30645933Prunus persicaCannabis sativa99.1247.7886.7451forward
CNT30577541Prunus persicaOryza barthii76.9242.9484350forward
CNT30116966Prunus persicaOryza nivara92.5311.7685.99421forward
CNT30726985Prunus persicaLupinus angustifolius60.6612.7688.41276forward

Expression of CNT30154378

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MKKGCDKKRSIFRALATVKRSSSDNSSNPRIAIMS*

Sequence

>CNT30154378
TACAATAAAGATATCTACAGTTGTGGCAACAGGCGCGTGATTTGGTAATACGCCAATTTGTCCACTATTAGTAGATAAAATAATTTCTTTCACTTCCGAA
TCCCAAGCAATTCGATTCGGGGTCAGTACACAAAGATTTAAGGTCATTTCTTCAATTTGCTCTCCATTTCTAAGTTCCTAAGGTCGTAGCTTTCGCAGTA
GCTTCATCAATGTTACCTACCAAATAAAAGGCCTGTTCAGGAAGGCCGTCTAATTCTCCAGAAAGGATCAATTTAAACCCTCTAATCGTTTCTGCTAGAC
CAACATATTTTCCTGGGGAACCGGTAAATACTTCTGCTATGAAAAAGGGTTGTGATAAGAAACGCTCAATTTTTCGTGCTCTTGCTACGGTTAAGCGATC
GTCTTCGGATAATTCGTCCAACCCAAGGATAGCTATAATGTCTTGAAGTTCTTTG