Detailed information on CNT30680374


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30386161Triticum urartuTriticum turgidum89.5586.0298.47523forward

Expression of CNT30680374

Peptides detected in this lncRNA

>peptide 1 (47 aa)
FFTSATTPGYKYTSNKHALLHNYIPSSTVYFPGKKKIKFHQRSSSPW*

>peptide 2 (52 aa)
FYIGYNTRVQVHIQQACIAPQLHTIIHGLLPRKEKNQVPPAIFFPVVAHSSD*

>peptide 3 (67 aa)
FLHRLQHQGTSTHPTSMHCSTITYHHPRSTSQERKKSSSTSDLLPRGSTLLGLVANSHRVPYLGAKA*

>peptide 4 (77 aa)
MKRVVVSVKYSCSPAVYHDGVLRMPILVSSSGMKMPAAPSIAHRQCTSSACTFHRKLSGSDPTPQNRSKIVHVDRCYQ

Sequence

>CNT30680374
TTTTTTACATCGGCTACAACACCAGGGTACAAGTACACATCCAACAAGCATGCATTGCTCCACAATTACATACCATCATCCACGGTCTACTTCCCAGGAA
AGAAAAAAATCAAGTTCCACCAGCGATCTTCTTCCCCGTGGTAGCACACTCCTCGGATTAGTTGCTAACTCCCACCGTGTTCCTTACTTGGGGGCAAAGG
CCTAAAACGTAACACCAAAAAGGGTCATACATCAGTACCCAAAAAATCATACATACACACATATATAGTACCAATATAATGTGTAGCATACGCGTACCCG
GAAGATGGTGGCGTGGCCGGGGTCAGCGAGGTGAGCGAAGAGCTCCACGATGAAGAGGGTGGTGGTGTCGGTGAAGTACTCCTGCTCCCCGGCGGTGTAC
CACGACGGTGTGTTGAGGATGCCGATCTTGGTCAGCAGCTCCGGGATGAAGATGCCCGCCGCGCCCAGCATCGCCCACCGGCAGTGCACCAGCTCCGCCT
GCACGTTCCACCGCAAGCTCTCCGGGTCGGATCCTACACCGCAAAATCGATCAAAGATTGTTCATGTCGATCGATGTTACCAAG