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Detailed information on CNT3067983


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30397853Leersia perrieriTriticum turgidum27.2615.7388.59184forward
CNT30109604Leersia perrieriOryza longistaminata24.8912.9994.05168forward

Expression of CNT3067983

Peptides detected in this lncRNA

>peptide 1 (72 aa)
MRQERGRGGGRGDPGLLTRAVESVFRFVRLAEFEILFVLFFLVAFVLFKDLMSRPQYNSIFVKKPDLDDRWP*

>peptide 2 (64 aa)
MINEPIAISRCPGGSEEPHRNPTPFSIRSSSPRPRPRPRRASESTIRGVSSAADHAGGRLPAIR*

Sequence

>CNT3067983
GTTATCCACCGTTCGATCTAGATCCGACGGATGATAAATGAGCCGATAGCCATTAGCAGATGCCCCGGAGGAAGTGAAGAACCCCACCGAAACCCAACCC
CATTCTCCATTCGCTCGTCGTCGCCGCGACCTCGTCCGCGTCCGCGTCGCGCTTCGGAATCGACCATTCGAGGCGTCTCCTCCGCCGCTGACCACGCCGG
CGGCCGCCTTCCGGCGATCCGGTAGAGGAGAACAGGAGGGGTTGACGCGCGGGATCGGAAGGGATGCGGCAGGAGCGGGGGAGGGGAGGGGGGCGTGGGG
ATCCCGGGCTTCTGACGAGGGCGGTGGAGAGTGTGTTCCGATTCGTCCGCCTGGCCGAGTTCGAGATCCTCTTCGTCCTCTTCTTCCTCGTCGCCTTCGT
CCTCTTCAAGGATCTCATGTCACGCCCACAGTACAACTCGATCTTTGTGAAGAAGCCTGATCTAGATGACCGATGGCCTTAGAGAACTCATGTAATGTTC
TTATAGTAGTGTGATCACTGTTCTCCTTTTTTGCTCTGTTGTCCAAAGTACATTTCTGATGTGCTCCTTGACTTCTGTTCTTATGGCTCGAGTGCTATCT
TTCAGGAGTATGAATATATTTAGTCTTTTTTTAATACTCATATAAAATTTTAACGGATTCTGTTTTTTGGTTACC