Detailed information on CNT30678111


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7Y052|CALM_EUPCH, E-value = 9e-27

BLAST vs NONCODE:
NONBRAT001381, E-value = 1e-14

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3039761Setaria viridisMarchantia polymorpha39.939.9989.19111forward

Expression of CNT30678111

Peptides detected in this lncRNA

>peptide 1 (89 aa)
FLLPAGVVLYYCTIGTASLGHHHLDELLVVDLAVAIDVRLADHLVDLLVGQLLAEVGHHVAELRGEARRGSGVGLAGEIREGDRGQGAI*

Sequence

>CNT30678111
GTTTCCTCCTTCCGGCGGGGGTAGTATTGTACTATTGTACCATCGGCACGGCCTCACTTGGCCATCATCACCTTGACGAACTCCTCGTAGTTGATCTGGC
CGTCGCCATCGACGTCCGCCTCGCGGATCATCTCGTCGACCTCCTCGTCGGTCAGCTTCTCGCCGAGGTTGGTCATCACGTGGCGGAGCTCCGCGGCGAG
GCGAGGCGAGGGAGCGGTGTCGGGCTGGCCGGAGAGATTAGGGAGGGCGACCGGGGGCAGGGAGCGATTTGAGGCCTC