Detailed information on CNT30677617


BLAST search results

BLAST vs Swiss-Prot:
sp|Q01595|CCDP_MAIZE, E-value = 2e-22

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3016364Setaria viridisZea mays41.8217.6688.72133forward

Expression of CNT30677617

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MFRGWVLLLHQLSILLRAGEVGRANLAALVEDEVEADGQVEVDAEDIGLNRGAEADGGVEVVF*

>peptide 2 (42 aa)
MRLRLTGKLRWMPRTSALIAVQRQTAASRWCSSTVHCVFCVLG

Sequence

>CNT30677617
GCAAAAGAATTACAACAAACTTGTTCGATCACATGCAACATCTCGCCATTGCAAAGCAATGAAGTAAAAGTTGGAATCGCGTGAGTACGAGAGTATGTTC
CGTGGATGGGTACTTCTGCTACATCAGCTCTCCATCTTACTGAGGGCAGGTGAAGTCGGCCGGGCAAATCTTGCCGCACTTGTTGAGGATGAGGTTGAGG
CTGACGGGCAAGTTGAGGTGGATGCCGAGGACATCGGCCTTAATCGCGGTGCAGAGGCAGACGGCGGCGTCGAGGTGGTGTTCTAGTACTGTGCACTGCG
TGTTCTGTGTTTTGGGAT