Detailed information on CNT3067716


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30554338Leersia perrieriOryza glaberrima4.3226.2284.6291forward

Expression of CNT3067716

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MIVLENWMHMRHKQRLHNETHDLLYFELIVFYILDFLSNRCRSCLP*

>peptide 2 (46 aa)
MLNIEQTSLHMFFSFENLDIYYKNRKIPYITFLYCKVDQEVITPHE*

>peptide 3 (38 aa)
MQVLPSLASLAMQLCKTCINPLGIQNIENNRLEVEQII*

>peptide 4 (39 aa)
MSNAHPVLMHNYRLHLQNQIHILENRKKNIARRESCLSW*

>peptide 5 (37 aa)
MRFYHISALSIRFSHEPIEKEKKRKEKKGIRFSYHYM*

>peptide 6 (55 aa)
MPIQFSCTIIDFIFKTKSIFLKTERKISLVVKVAYHGDHRKWQLLVYLNVNERID*

Sequence

>CNT3067716
TAAAGCTTGATTATGAGTAATCCCATTAGAAGATGTGATTTATCATATCTTTGCTCTTAGTATCACATTCAGCCGCGAGCCAAAAGAAAATAAAAAAGAA
GAAGATGCGATTTTATCATATCAGTGCTCTTAGTATCAGATTCAGCCACGAGCCAATAGAAAAAGAAAAGAAAAGAAAAGAAAAGAAAGGTATCAGATTC
AGCTACCACTATATGTGACTATATATCTATCACTCGCTCTCCCATTCCGCCATTCCTCCCTCGCGGCCGCACCGCCGTCACTGCGGTATGATGGAGAAGA
GGAGAGAGACGACATCTCAACGGCGTGGATGATGGAGTCGAGTCCAACAATATCCAAATCCCGATGAGATGAGGCCTCGGGAATCAGGAGCAACTTCACT
GGATATCCCTAGTCATATTCAATCTAGATGAGAGTTTGTCTTCTCCCCACGCAGATCTATCTGAAGGGAATACTTCTCTATTGCCAAAGGTTCTCCTGAT
GCTTAACATTGAACAAACAAGCTTACATATGTTTTTCTCTTTTGAGAACCTCGACATTTACTATAAAAACAGAAAAATACCTTACATCACATTTCTATAT
TGTAAGGTGGATCAAGAAGTAATAACTCCTCATGAGTGAGACAACAGAAAGGAAATAGAAGCTACCGGATTCATGCCCCCCTAAGAAAATCTCTCAAGAT
CCTTAAAAAATGAAAATAAGTAAGAGCAGCAGTAGTAGAAAGTCATAAGTGAATTCTTTCAGTTACGTTCAGAGCAGTAGTGTTATAGATCGGCGTTATG
GAATAAAATTTCATAGGCGTAGAAAGTAATCAATAGATAGTCCTAGTTCTTTTTTGTTTCGGATATTTCCTATTTCCAGTCGGTTTAAATTTCCTAAATA
TTAGTTTGGCACCTAGTATATAAGGGGCCTTGTACTAGGAAGTGAAGCAATAAAGATATCAAAGGGCCTTGCCCACCAAAATCGCCGATCATTGCCTCGA
TCTCCCGGAAAGCCGGTGACTTGCTTCACTTCCTAGTACAATACTAGGCCCCTTATACACTGGGTGCCAAACTAATATTTAGGAAATATAAACCGACTGG
AAATAGGAAATATTTGAAACCAAAAAGAACTAGGACTATCTACGGATTACTTTCTACGCCTATGAAATTTTATTCCATAACGTCGATCGATTAACAGTAG
TAGTAGCAATAGACGAGTAACTATCTTTTTACTGTTTTAGTTTCTATGGTCACCATGATGGGCAGCCATCACGATGAGCGATTGTTGTTCTTCTAGCAAC
GAACTCTTCCTGTTTTCAAGAATGCGGATTTGGTTCTATGATTGTGCTTGAAAATTGGATGCACATGAGACATAAACAAAGGCTGCATAATGAAACACAT
GATTTGCTTTACTTTGAGCTTATTGTTTTCTATATTTTGGATTTCCTGAGCAATCGATGCAGGTCTTGCCTTCCTTAGCAAGTCTTGCCATGCAACTGTG
CAAGACTTGCATCAATCCCTTAGGAATCCAAAATATAGAAAACAATAGGCTTGAAGTAGAGCAAATCATATAAGTTTTGTTGGAGAGCCTTTGTTTATGT
CTAATGCCCATCCAGTTCTCATGCACAATTATAGACTTCATCTTCAAAACCAAATCCATATTCTTGAAAACAGAAAGAAAAATATCGCTCGTCGTGAAAG
TTGCCTATCATGGTGACCATAGAAAATGGCAGTTGCTCGTCTATCTCAACGTAAATGAACGAATTGACTAAAATCTCCCTGCTACTACTACTGCGTCTTC
CTTATTTTCTTTTTTTCTTTAGGATTTAGAGGATACGAGATTTCTTAGCAGGTGTGAACCTGTAGCTTCTTCTTTTGTTCTCTTGTCTTGCTTACGAGGA
GCTGTACTTATCAAGAGAGTAGTGAGCATAAATGCTGGCGAGTTTTTTTTTTTTTCAGGTGTACTGTGTATAGATATCTCATGTATTACTTCTATGAACA
ATAGCCTCTTGTTCTTGTTGTAGAAGAATATTTGTATTACAAAGTTTTCTTGTGTATTTCAAAATCAATACACACTTGTTTTTATTGCTCGACGACATTG
TTGTTTT