Detailed information on CNT30676837


BLAST search results

BLAST vs Swiss-Prot:
sp|Q41975|TIP22_ARATH, E-value = 2e-12

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523938Setaria viridisSetaria italica90.3841.78100216forward

Expression of CNT30676837

Peptides detected in this lncRNA

>peptide 1 (42 aa)
RPNIITRRDEVTIDDDEIDTSGWVRTADFHAVHGYSCWPTGW*

>peptide 2 (31 aa)
MMKLTRRVGCGLRTFMPFMGTPAGQPAGRRR*

Sequence

>CNT30676837
AGACCAAACATAATCACAAGACGAGACGAGGTGACAATCGACGATGATGAAATTGACACGTCGGGTTGGGTGCGGACTGCGGACTTTCATGCCGTTCATG
GGTACTCCTGCTGGCCAACCGGCTGGTAGGAGGCGATGAACACGTCGCCGTAGACAAGCCCGGCCAGGCCGCCGCCGATGAGCGGGCCGACCCAGTAGAC
CCAGTTGCCGGCGAAGATGGTGATGTGGCCGCCGACGGC