Detailed information on CNT30676293


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30370079Setaria viridisOryza glumipatula29.318.2291.74121forward

Expression of CNT30676293

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MEARPVSHACRPASSYSNQINLNSNVKTSDPHTSRFSSTR*

>peptide 2 (44 aa)
MRLTSIGRLRLTARNSAIEALPAIFATRKVITGTQAHKAETKLT*

>peptide 3 (40 aa)
MYWCRKRNKQQIKAKVIKRGVRICHCMHGSTSSQSCMQTS*

Sequence

>CNT30676293
CATGTACTGGTGCAGGAAAAGAAATAAGCAACAAATTAAAGCAAAGGTGATCAAACGAGGCGTACGCATTTGCCACTGCATGCATGGAAGCACGTCCAGT
CAGTCATGCATGCAGACCAGCTAGCTCGTACTCAAACCAAATAAACCTGAATTCAAACGTCAAGACATCCGATCCGCATACATCGCGATTCTCGAGCACG
CGGTAGAATGCTTAGAGGCACTTGAACCCGGTGGGCACGGTCTTGCCGCAGTGGTTGAGGATGAGGCTGACGTCGATTGGCAGGTTGAGGTTGACGGCGA
GGAACAGTGCGATCGAGGCCTTGCCTGCCATTTTTGCTACACGGAAAGTAATTACTGGAACACAGGCGCACAAAGCAGAAACAAAATTAACTTGATCGCT
AAGTGCCTGTGAT